Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.48■■□□□ 1.19
CDC42EP4Q9H3Q1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 AC010542.4-201ENST00000563151 1910 ntBASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 FAM99A-202ENST00000538190 1989 ntBASIC22.47■■□□□ 1.19
CDC42EP4Q9H3Q1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDC42EP4Q9H3Q1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 HSD17B1P1-201ENST00000590052 955 ntBASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDC42EP4Q9H3Q1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDC42EP4Q9H3Q1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 BHLHE23-202ENST00000612929 1109 ntBASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDC42EP4Q9H3Q1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 SNX5-217ENST00000606557 1087 ntBASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDC42EP4Q9H3Q1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDC42EP4Q9H3Q1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CDC42EP4Q9H3Q1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CDC42EP4Q9H3Q1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.18
CDC42EP4Q9H3Q1 LINC01960-201ENST00000563759 1884 ntBASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms