Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 KRT8P33-201ENST00000508125 1423 ntBASIC17.21■□□□□ 0.34
TRGV9Q99603 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRGV9Q99603 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.2■□□□□ 0.34
TRGV9Q99603 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV9Q99603 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.2■□□□□ 0.34
TRGV9Q99603 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV9Q99603 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV9Q99603 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.2■□□□□ 0.34
TRGV9Q99603 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRGV9Q99603 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV9Q99603 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV9Q99603 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV9Q99603 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV9Q99603 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV9Q99603 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.19■□□□□ 0.34
TRGV9Q99603 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
TRGV9Q99603 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV9Q99603 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV9Q99603 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRGV9Q99603 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 AC021242.3-201ENST00000607598 1377 ntBASIC17.18■□□□□ 0.34
TRGV9Q99603 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRGV9Q99603 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.18■□□□□ 0.34
TRGV9Q99603 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 DUX4L4-201ENST00000566884 1269 ntBASIC17.18■□□□□ 0.34
TRGV9Q99603 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.18■□□□□ 0.34
TRGV9Q99603 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRGV9Q99603 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRGV9Q99603 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRGV9Q99603 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV9Q99603 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRGV9Q99603 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.17■□□□□ 0.34
TRGV9Q99603 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV9Q99603 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV9Q99603 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRGV9Q99603 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV9Q99603 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV9Q99603 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.17■□□□□ 0.34
TRGV9Q99603 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.17■□□□□ 0.34
TRGV9Q99603 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.17■□□□□ 0.34
TRGV9Q99603 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV9Q99603 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRGV9Q99603 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRGV9Q99603 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV9Q99603 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRGV9Q99603 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 BX664725.1-201ENST00000438252 379 ntBASIC17.16■□□□□ 0.34
TRGV9Q99603 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRGV9Q99603 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.16■□□□□ 0.34
TRGV9Q99603 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 LINC01960-201ENST00000563759 1884 ntBASIC17.16■□□□□ 0.34
TRGV9Q99603 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRGV9Q99603 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV9Q99603 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRGV9Q99603 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.15■□□□□ 0.34
TRGV9Q99603 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRGV9Q99603 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRGV9Q99603 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.15■□□□□ 0.34
TRGV9Q99603 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRGV9Q99603 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRGV9Q99603 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms