Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
SNED1Q8TER0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNED1Q8TER0 LINC01529-204ENST00000636474 1715 ntBASIC27.22■■□□□ 1.95
SNED1Q8TER0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNED1Q8TER0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNED1Q8TER0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SNED1Q8TER0 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
SNED1Q8TER0 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
SNED1Q8TER0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.22■■□□□ 1.95
SNED1Q8TER0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.22■■□□□ 1.95
SNED1Q8TER0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.22■■□□□ 1.95
SNED1Q8TER0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC27.21■■□□□ 1.95
SNED1Q8TER0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
SNED1Q8TER0 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SNED1Q8TER0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
SNED1Q8TER0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SNED1Q8TER0 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SNED1Q8TER0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 AL355802.2-201ENST00000402069 882 ntBASIC27.2■■□□□ 1.94
SNED1Q8TER0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC27.2■■□□□ 1.94
SNED1Q8TER0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC27.2■■□□□ 1.94
SNED1Q8TER0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SNED1Q8TER0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.2■■□□□ 1.94
SNED1Q8TER0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
SNED1Q8TER0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 MIR663A-201ENST00000385250 93 ntBASIC27.19■■□□□ 1.94
SNED1Q8TER0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC27.19■■□□□ 1.94
SNED1Q8TER0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
SNED1Q8TER0 AC135731.1-201ENST00000569415 2548 ntBASIC27.18■■□□□ 1.94
SNED1Q8TER0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC27.18■■□□□ 1.94
SNED1Q8TER0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.18■■□□□ 1.94
SNED1Q8TER0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.18■■□□□ 1.94
SNED1Q8TER0 AL109923.1-201ENST00000618799 583 ntBASIC27.18■■□□□ 1.94
SNED1Q8TER0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
SNED1Q8TER0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SNED1Q8TER0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNED1Q8TER0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC27.17■■□□□ 1.94
SNED1Q8TER0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNED1Q8TER0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
SNED1Q8TER0 BX005040.4-201ENST00000637145 1518 ntBASIC27.17■■□□□ 1.94
SNED1Q8TER0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SNED1Q8TER0 AC006970.2-201ENST00000450065 779 ntBASIC27.16■■□□□ 1.94
SNED1Q8TER0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SNED1Q8TER0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SNED1Q8TER0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
SNED1Q8TER0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.16■■□□□ 1.94
SNED1Q8TER0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.16■■□□□ 1.94
SNED1Q8TER0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SNED1Q8TER0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC27.16■■□□□ 1.94
SNED1Q8TER0 ESRRAP2-201ENST00000418437 1549 ntBASIC27.15■■□□□ 1.94
SNED1Q8TER0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.15■■□□□ 1.94
SNED1Q8TER0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.15■■□□□ 1.94
SNED1Q8TER0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.15■■□□□ 1.94
SNED1Q8TER0 AC020928.2-201ENST00000588717 2197 ntBASIC27.15■■□□□ 1.94
SNED1Q8TER0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.15■■□□□ 1.94
SNED1Q8TER0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC27.15■■□□□ 1.94
SNED1Q8TER0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SNED1Q8TER0 AL050303.2-201ENST00000619798 666 ntBASIC27.15■■□□□ 1.94
SNED1Q8TER0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SNED1Q8TER0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.14■■□□□ 1.94
SNED1Q8TER0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SNED1Q8TER0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
SNED1Q8TER0 AC142086.2-201ENST00000569753 217 ntBASIC27.14■■□□□ 1.93
SNED1Q8TER0 SMUG1P1-201ENST00000590640 811 ntBASIC27.14■■□□□ 1.93
SNED1Q8TER0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.14■■□□□ 1.93
SNED1Q8TER0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SNED1Q8TER0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNED1Q8TER0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SNED1Q8TER0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.13■■□□□ 1.93
SNED1Q8TER0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms