Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 AL137060.1-201ENST00000618151 2648 ntBASIC21.54■■□□□ 1.04
CPSF7Q8N684 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CPSF7Q8N684 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF7Q8N684 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.54■■□□□ 1.04
CPSF7Q8N684 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF7Q8N684 AL353803.4-201ENST00000565882 1934 ntBASIC21.54■■□□□ 1.04
CPSF7Q8N684 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF7Q8N684 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.54■■□□□ 1.04
CPSF7Q8N684 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CPSF7Q8N684 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.54■■□□□ 1.04
CPSF7Q8N684 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CPSF7Q8N684 UNC93B8-201ENST00000511903 705 ntBASIC21.53■■□□□ 1.04
CPSF7Q8N684 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF7Q8N684 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF7Q8N684 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CPSF7Q8N684 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 AC080038.3-201ENST00000623346 1952 ntBASIC21.52■■□□□ 1.04
CPSF7Q8N684 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 AC021242.3-201ENST00000607598 1377 ntBASIC21.52■■□□□ 1.04
CPSF7Q8N684 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF7Q8N684 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.52■■□□□ 1.04
CPSF7Q8N684 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF7Q8N684 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF7Q8N684 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CPSF7Q8N684 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CPSF7Q8N684 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CPSF7Q8N684 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CPSF7Q8N684 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.52■■□□□ 1.03
CPSF7Q8N684 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.03
CPSF7Q8N684 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.51■■□□□ 1.03
CPSF7Q8N684 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF7Q8N684 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF7Q8N684 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CPSF7Q8N684 TSPY9P-201ENST00000440215 945 ntBASIC21.51■■□□□ 1.03
CPSF7Q8N684 TSPY11P-201ENST00000442607 1045 ntBASIC21.51■■□□□ 1.03
CPSF7Q8N684 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
CPSF7Q8N684 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
CPSF7Q8N684 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.51■■□□□ 1.03
CPSF7Q8N684 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CPSF7Q8N684 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.5■■□□□ 1.03
CPSF7Q8N684 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.5■■□□□ 1.03
CPSF7Q8N684 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.5■■□□□ 1.03
CPSF7Q8N684 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CPSF7Q8N684 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.5■■□□□ 1.03
CPSF7Q8N684 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 AC087742.1-201ENST00000575880 1738 ntBASIC21.49■■□□□ 1.03
CPSF7Q8N684 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 KRT16P3-201ENST00000439127 1283 ntBASIC21.49■■□□□ 1.03
CPSF7Q8N684 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CPSF7Q8N684 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CPSF7Q8N684 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.48■■□□□ 1.03
CPSF7Q8N684 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CPSF7Q8N684 FBXW4P1-201ENST00000426721 2239 ntBASIC21.47■■□□□ 1.03
CPSF7Q8N684 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.47■■□□□ 1.03
CPSF7Q8N684 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.47■■□□□ 1.03
CPSF7Q8N684 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.47■■□□□ 1.03
CPSF7Q8N684 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms