Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SFTPA1Q8IWL2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
SFTPA1Q8IWL2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SFTPA1Q8IWL2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.48■■□□□ 1.19
SFTPA1Q8IWL2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.47■■□□□ 1.19
SFTPA1Q8IWL2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SFTPA1Q8IWL2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
SFTPA1Q8IWL2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.45■■□□□ 1.19
SFTPA1Q8IWL2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
SFTPA1Q8IWL2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 TPRG1LP1-201ENST00000598702 760 ntBASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.44■■□□□ 1.18
SFTPA1Q8IWL2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SFTPA1Q8IWL2 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms