Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SHC4Q6S5L8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25■■□□□ 1.59
SHC4Q6S5L8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SHC4Q6S5L8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SHC4Q6S5L8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
SHC4Q6S5L8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25■■□□□ 1.59
SHC4Q6S5L8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.99■■□□□ 1.59
SHC4Q6S5L8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 AC009086.3-201ENST00000623486 1008 ntBASIC24.98■■□□□ 1.59
SHC4Q6S5L8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
SHC4Q6S5L8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SHC4Q6S5L8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 MIR6724-1-201ENST00000616420 92 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 MIR6724-2-201ENST00000616483 92 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 MIR6724-4-201ENST00000617390 92 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 MIR6724-3-201ENST00000622482 92 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 AL035685.1-201ENST00000636663 812 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 AC004687.1-201ENST00000579003 1625 ntBASIC24.96■■□□□ 1.59
SHC4Q6S5L8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SHC4Q6S5L8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SHC4Q6S5L8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
SHC4Q6S5L8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 LINC01960-201ENST00000563759 1884 ntBASIC24.94■■□□□ 1.58
SHC4Q6S5L8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SHC4Q6S5L8 AC092053.2-201ENST00000640557 1818 ntBASIC24.93■■□□□ 1.58
SHC4Q6S5L8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.93■■□□□ 1.58
SHC4Q6S5L8 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.93■■□□□ 1.58
SHC4Q6S5L8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
SHC4Q6S5L8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
SHC4Q6S5L8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
SHC4Q6S5L8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SHC4Q6S5L8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
SHC4Q6S5L8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.9■■□□□ 1.58
SHC4Q6S5L8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.9■■□□□ 1.58
SHC4Q6S5L8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.9■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms