Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 AC011767.1-201ENST00000617410 1153 ntBASIC15.07■□□□□ 0
VPS13DQ5THJ4 AL050303.2-201ENST00000619798 666 ntBASIC15.07■□□□□ 0
VPS13DQ5THJ4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.07■□□□□ 0
VPS13DQ5THJ4 AL109923.1-201ENST00000618799 583 ntBASIC15.07■□□□□ 0
VPS13DQ5THJ4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
VPS13DQ5THJ4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.06■□□□□ 0
VPS13DQ5THJ4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
VPS13DQ5THJ4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.06■□□□□ 0
VPS13DQ5THJ4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
VPS13DQ5THJ4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.05■□□□□ 0
VPS13DQ5THJ4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 MFSD11-216ENST00000590393 1141 ntBASIC15.05■□□□□ -0
VPS13DQ5THJ4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 AC079630.1-202ENST00000618127 1840 ntBASIC15.05■□□□□ -0
VPS13DQ5THJ4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.05■□□□□ -0
VPS13DQ5THJ4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC15.05■□□□□ -0
VPS13DQ5THJ4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 SLC7A5P2-201ENST00000553010 536 ntBASIC15.04■□□□□ -0
VPS13DQ5THJ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC15.04■□□□□ -0
VPS13DQ5THJ4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC15.04■□□□□ -0
VPS13DQ5THJ4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 AL355802.2-201ENST00000402069 882 ntBASIC15.03■□□□□ -0
VPS13DQ5THJ4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.03■□□□□ -0
VPS13DQ5THJ4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
VPS13DQ5THJ4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms