Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.2■□□□□ 0.66
RSPO1Q2MKA7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.2■□□□□ 0.66
RSPO1Q2MKA7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.2■□□□□ 0.66
RSPO1Q2MKA7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO1Q2MKA7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RSPO1Q2MKA7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 MIR4466-201ENST00000606121 54 ntBASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 ECEL1P1-201ENST00000373592 1742 ntBASIC19.19■□□□□ 0.66
RSPO1Q2MKA7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RSPO1Q2MKA7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 AC080038.3-201ENST00000623346 1952 ntBASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RSPO1Q2MKA7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 LINC00526-201ENST00000581067 1875 ntBASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 AC242852.2-201ENST00000615738 1807 ntBASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RSPO1Q2MKA7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RSPO1Q2MKA7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RSPO1Q2MKA7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RSPO1Q2MKA7 LINC01960-201ENST00000563759 1884 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 AC139530.1-201ENST00000575312 1977 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 MIR3181-201ENST00000578512 73 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 pRNA.6-201ENST00000610482 90 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 pRNA.5-201ENST00000612139 90 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 pRNA.11-201ENST00000618423 90 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 pRNA.13-201ENST00000619112 90 ntBASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RSPO1Q2MKA7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms