Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH11P55287 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
CDH11P55287 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH11P55287 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH11P55287 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CDH11P55287 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH11P55287 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH11P55287 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH11P55287 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH11P55287 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH11P55287 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CDH11P55287 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH11P55287 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH11P55287 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CDH11P55287 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CDH11P55287 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH11P55287 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDH11P55287 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CDH11P55287 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH11P55287 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH11P55287 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.1■□□□□ 0.81
CDH11P55287 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 MIR6724-1-201ENST00000616420 92 ntBASIC20.1■□□□□ 0.81
CDH11P55287 MIR6724-2-201ENST00000616483 92 ntBASIC20.1■□□□□ 0.81
CDH11P55287 MIR6724-4-201ENST00000617390 92 ntBASIC20.1■□□□□ 0.81
CDH11P55287 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 MIR6724-3-201ENST00000622482 92 ntBASIC20.1■□□□□ 0.81
CDH11P55287 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH11P55287 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.1■□□□□ 0.81
CDH11P55287 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CDH11P55287 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH11P55287 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.09■□□□□ 0.81
CDH11P55287 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH11P55287 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH11P55287 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.09■□□□□ 0.81
CDH11P55287 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.09■□□□□ 0.81
CDH11P55287 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH11P55287 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.08■□□□□ 0.81
CDH11P55287 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH11P55287 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH11P55287 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH11P55287 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDH11P55287 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDH11P55287 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.08■□□□□ 0.81
CDH11P55287 AL117332.1-201ENST00000622628 974 ntBASIC20.08■□□□□ 0.81
CDH11P55287 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
CDH11P55287 AC007375.3-201ENST00000600936 2314 ntBASIC20.08■□□□□ 0.8
CDH11P55287 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDH11P55287 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.07■□□□□ 0.8
CDH11P55287 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH11P55287 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH11P55287 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH11P55287 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.07■□□□□ 0.8
CDH11P55287 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH11P55287 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH11P55287 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.07■□□□□ 0.8
CDH11P55287 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.07■□□□□ 0.8
CDH11P55287 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDH11P55287 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CDH11P55287 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH11P55287 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDH11P55287 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms