Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 TMA16YOR252W 537 nt5.28□□□□□ -1.56
HDA1P53973 snR17bsnR17b 332 nt5.28□□□□□ -1.56
HDA1P53973 CNS1YBR155W 1158 nt5.28□□□□□ -1.56
HDA1P53973 SKG3YLR187W 3081 nt5.28□□□□□ -1.56
HDA1P53973 MDM38YOL027C 1722 nt5.28□□□□□ -1.56
HDA1P53973 PAL1YDR348C 1500 nt5.28□□□□□ -1.56
HDA1P53973 NGL2YMR285C 1548 nt5.28□□□□□ -1.56
HDA1P53973 SEO1YAL067C 1782 nt5.27□□□□□ -1.57
HDA1P53973 KIN28YDL108W 921 nt5.27□□□□□ -1.57
HDA1P53973 RAD55YDR076W 1221 nt5.27□□□□□ -1.57
HDA1P53973 RPL24BYGR148C 468 nt5.27□□□□□ -1.57
HDA1P53973 RTA1YGR213C 954 nt5.27□□□□□ -1.57
HDA1P53973 ART10YLR392C 1557 nt5.27□□□□□ -1.57
HDA1P53973 MAG2YLR427W 2013 nt5.27□□□□□ -1.57
HDA1P53973 YLR462WYLR462W 609 nt5.27□□□□□ -1.57
HDA1P53973 TPP1YMR156C 717 nt5.27□□□□□ -1.57
HDA1P53973 RFM1YOR279C 933 nt5.27□□□□□ -1.57
HDA1P53973 DIM1YPL266W 957 nt5.27□□□□□ -1.57
HDA1P53973 SPP381YBR152W 876 nt5.27□□□□□ -1.57
HDA1P53973 RCK2YLR248W 1833 nt5.26□□□□□ -1.57
HDA1P53973 TPS3YMR261C 3165 nt5.26□□□□□ -1.57
HDA1P53973 YDR056CYDR056C 618 nt5.26□□□□□ -1.57
HDA1P53973 VAR1Q0140 1197 nt5.26□□□□□ -1.57
HDA1P53973 PEX21YGR239C 867 nt5.26□□□□□ -1.57
HDA1P53973 YJL218WYJL218W 591 nt5.26□□□□□ -1.57
HDA1P53973 FIP1YJR093C 984 nt5.26□□□□□ -1.57
HDA1P53973 USB1YLR132C 873 nt5.26□□□□□ -1.57
HDA1P53973 SHE1YBL031W 1017 nt5.26□□□□□ -1.57
HDA1P53973 SUB1YMR039C 879 nt5.26□□□□□ -1.57
HDA1P53973 CDC28YBR160W 897 nt5.26□□□□□ -1.57
HDA1P53973 GDT1YBR187W 843 nt5.26□□□□□ -1.57
HDA1P53973 SPS2YDR522C 1509 nt5.26□□□□□ -1.57
HDA1P53973 ARN2YHL047C 1863 nt5.26□□□□□ -1.57
HDA1P53973 HIR2YOR038C 2628 nt5.26□□□□□ -1.57
HDA1P53973 PWP1YLR196W 1731 nt5.26□□□□□ -1.57
HDA1P53973 FDC1YDR539W 1512 nt5.25□□□□□ -1.57
HDA1P53973 AUA1YFL010W-A 285 nt5.25□□□□□ -1.57
HDA1P53973 YKL123WYKL123W 381 nt5.25□□□□□ -1.57
HDA1P53973 ACP1YKL192C 378 nt5.25□□□□□ -1.57
HDA1P53973 YLR339CYLR339C 552 nt5.25□□□□□ -1.57
HDA1P53973 ATG34YOL083W 1239 nt5.25□□□□□ -1.57
HDA1P53973 CIN5YOR028C 888 nt5.25□□□□□ -1.57
HDA1P53973 ECM23YPL021W 564 nt5.25□□□□□ -1.57
HDA1P53973 YCL012CYCL012C 405 nt5.25□□□□□ -1.57
HDA1P53973 RGP1YDR137W 1992 nt5.25□□□□□ -1.57
HDA1P53973 TSL1YML100W 3297 nt5.24□□□□□ -1.57
HDA1P53973 YDL162CYDL162C 357 nt5.24□□□□□ -1.57
HDA1P53973 snR83snR83 306 nt5.24□□□□□ -1.57
HDA1P53973 PHO86YJL117W 936 nt5.24□□□□□ -1.57
HDA1P53973 YAR023CYAR023C 540 nt5.24□□□□□ -1.57
HDA1P53973 YMR181CYMR181C 465 nt5.24□□□□□ -1.57
HDA1P53973 TPT1YOL102C 693 nt5.24□□□□□ -1.57
HDA1P53973 YOR152CYOR152C 771 nt5.24□□□□□ -1.57
HDA1P53973 GRE1YPL223C 507 nt5.24□□□□□ -1.57
HDA1P53973 CCL1YPR025C 1182 nt5.24□□□□□ -1.57
HDA1P53973 YBR219CYBR219C 384 nt5.24□□□□□ -1.57
HDA1P53973 MPH2YDL247W 1830 nt5.24□□□□□ -1.57
HDA1P53973 CBF5YLR175W 1452 nt5.24□□□□□ -1.57
HDA1P53973 COM2YER130C 1332 nt5.23□□□□□ -1.57
HDA1P53973 KTR6YPL053C 1341 nt5.23□□□□□ -1.57
HDA1P53973 MEC3YLR288C 1425 nt5.23□□□□□ -1.57
HDA1P53973 ACC1YNR016C 6702 nt5.23□□□□□ -1.57
HDA1P53973 CWC23YGL128C 852 nt5.23□□□□□ -1.57
HDA1P53973 RPL43BYJR094W-A 279 nt5.23□□□□□ -1.57
HDA1P53973 CPR3YML078W 549 nt5.23□□□□□ -1.57
HDA1P53973 YML119WYML119W 1074 nt5.23□□□□□ -1.57
HDA1P53973 YBL096CYBL096C 309 nt5.23□□□□□ -1.57
HDA1P53973 RMI1YPL024W 726 nt5.23□□□□□ -1.57
HDA1P53973 YTM1YOR272W 1383 nt5.23□□□□□ -1.57
HDA1P53973 KGD1YIL125W 3045 nt5.23□□□□□ -1.57
HDA1P53973 NOP58YOR310C 1536 nt5.23□□□□□ -1.57
HDA1P53973 YDR261W-AYDR261W-A 1317 nt5.23□□□□□ -1.57
HDA1P53973 IMA3YIL172C 1770 nt5.22□□□□□ -1.57
HDA1P53973 IMA4YJL221C 1770 nt5.22□□□□□ -1.57
HDA1P53973 HMRA1YCR097W 381 nt5.22□□□□□ -1.57
HDA1P53973 YGL185CYGL185C 1140 nt5.22□□□□□ -1.57
HDA1P53973 HIS6YIL020C 786 nt5.22□□□□□ -1.57
HDA1P53973 YKL177WYKL177W 339 nt5.22□□□□□ -1.57
HDA1P53973 CYC2YOR037W 1101 nt5.22□□□□□ -1.57
HDA1P53973 MGE1YOR232W 687 nt5.22□□□□□ -1.57
HDA1P53973 RRP36YOR287C 903 nt5.22□□□□□ -1.57
HDA1P53973 MAK3YPR051W 531 nt5.22□□□□□ -1.57
HDA1P53973 ICS2YBR157C 768 nt5.22□□□□□ -1.57
HDA1P53973 YBR196C-BYBR196C-B 105 nt5.22□□□□□ -1.57
HDA1P53973 snR44snR44 211 nt5.22□□□□□ -1.57
HDA1P53973 UBP8YMR223W 1416 nt5.22□□□□□ -1.57
HDA1P53973 SPO1YNL012W 1896 nt5.22□□□□□ -1.57
HDA1P53973 GGA1YDR358W 1674 nt5.21□□□□□ -1.57
HDA1P53973 NMD3YHR170W 1557 nt5.21□□□□□ -1.57
HDA1P53973 HSP42YDR171W 1128 nt5.21□□□□□ -1.58
HDA1P53973 TYW3YGL050W 822 nt5.21□□□□□ -1.58
HDA1P53973 DOG2YHR043C 741 nt5.21□□□□□ -1.58
HDA1P53973 DOG1YHR044C 741 nt5.21□□□□□ -1.58
HDA1P53973 VPS25YJR102C 609 nt5.21□□□□□ -1.58
HDA1P53973 TAP42YMR028W 1101 nt5.21□□□□□ -1.58
HDA1P53973 BUD17YNR027W 954 nt5.21□□□□□ -1.58
HDA1P53973 CKA2YOR061W 1020 nt5.21□□□□□ -1.58
HDA1P53973 YFL040WYFL040W 1623 nt5.21□□□□□ -1.58
HDA1P53973 ALG6YOR002W 1635 nt5.21□□□□□ -1.58
HDA1P53973 YPS7YDR349C 1791 nt5.21□□□□□ -1.58
Retrieved 100 of 7,029 protein–RNA pairs in 17.1 ms