Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 AC026310.3-201ENST00000625186 2373 ntBASIC16.2■□□□□ 0.18
CKS2P33552 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CKS2P33552 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 ZNRF2P2-203ENST00000454624 420 ntBASIC16.2■□□□□ 0.18
CKS2P33552 ECEL1P2-201ENST00000461596 1295 ntBASIC16.2■□□□□ 0.18
CKS2P33552 AC092296.2-201ENST00000589470 999 ntBASIC16.2■□□□□ 0.18
CKS2P33552 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC16.2■□□□□ 0.18
CKS2P33552 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.2■□□□□ 0.18
CKS2P33552 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CKS2P33552 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
CKS2P33552 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.19■□□□□ 0.18
CKS2P33552 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.19■□□□□ 0.18
CKS2P33552 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.19■□□□□ 0.18
CKS2P33552 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CKS2P33552 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CKS2P33552 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CKS2P33552 AC079630.1-202ENST00000618127 1840 ntBASIC16.18■□□□□ 0.18
CKS2P33552 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC16.18■□□□□ 0.18
CKS2P33552 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CKS2P33552 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CKS2P33552 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CKS2P33552 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.17■□□□□ 0.18
CKS2P33552 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CKS2P33552 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.17■□□□□ 0.18
CKS2P33552 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.17■□□□□ 0.18
CKS2P33552 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 AC080038.3-201ENST00000623346 1952 ntBASIC16.17■□□□□ 0.18
CKS2P33552 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC16.17■□□□□ 0.18
CKS2P33552 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CKS2P33552 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CKS2P33552 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC16.17■□□□□ 0.18
CKS2P33552 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CKS2P33552 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CKS2P33552 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CKS2P33552 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CKS2P33552 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CKS2P33552 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
CKS2P33552 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CKS2P33552 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CKS2P33552 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CKS2P33552 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CKS2P33552 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CKS2P33552 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
CKS2P33552 MLEC-202ENST00000412616 841 ntTSL 3 BASIC16.15■□□□□ 0.18
CKS2P33552 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CKS2P33552 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.15■□□□□ 0.18
CKS2P33552 GDI1-215ENST00000630693 786 ntTSL 4 BASIC16.15■□□□□ 0.18
CKS2P33552 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CKS2P33552 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CKS2P33552 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CKS2P33552 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CKS2P33552 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CKS2P33552 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CKS2P33552 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.14■□□□□ 0.17
CKS2P33552 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.14■□□□□ 0.17
CKS2P33552 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CKS2P33552 STK32C-205ENST00000456004 607 ntTSL 2 BASIC16.14■□□□□ 0.17
CKS2P33552 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms