Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CHRNA1P02708 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.28■■□□□ 1.48
CHRNA1P02708 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.28■■□□□ 1.48
CHRNA1P02708 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.28■■□□□ 1.48
CHRNA1P02708 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.28■■□□□ 1.48
CHRNA1P02708 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.28■■□□□ 1.48
CHRNA1P02708 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CHRNA1P02708 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.27■■□□□ 1.48
CHRNA1P02708 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.27■■□□□ 1.48
CHRNA1P02708 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRNA1P02708 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRNA1P02708 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRNA1P02708 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CHRNA1P02708 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.27■■□□□ 1.48
CHRNA1P02708 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.27■■□□□ 1.48
CHRNA1P02708 AC004687.1-201ENST00000579003 1625 ntBASIC24.27■■□□□ 1.48
CHRNA1P02708 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHRNA1P02708 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRNA1P02708 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRNA1P02708 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHRNA1P02708 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.26■■□□□ 1.47
CHRNA1P02708 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.26■■□□□ 1.47
CHRNA1P02708 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.26■■□□□ 1.47
CHRNA1P02708 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.26■■□□□ 1.47
CHRNA1P02708 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHRNA1P02708 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CHRNA1P02708 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHRNA1P02708 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.25■■□□□ 1.47
CHRNA1P02708 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHRNA1P02708 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.25■■□□□ 1.47
CHRNA1P02708 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.25■■□□□ 1.47
CHRNA1P02708 AL139125.2-201ENST00000623134 1869 ntBASIC24.25■■□□□ 1.47
CHRNA1P02708 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.25■■□□□ 1.47
CHRNA1P02708 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHRNA1P02708 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.24■■□□□ 1.47
CHRNA1P02708 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CHRNA1P02708 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHRNA1P02708 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.24■■□□□ 1.47
CHRNA1P02708 KRT18P61-201ENST00000585825 1298 ntBASIC24.24■■□□□ 1.47
CHRNA1P02708 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHRNA1P02708 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CHRNA1P02708 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHRNA1P02708 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.23■■□□□ 1.47
CHRNA1P02708 TPRG1LP1-201ENST00000598702 760 ntBASIC24.23■■□□□ 1.47
CHRNA1P02708 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.23■■□□□ 1.47
CHRNA1P02708 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CHRNA1P02708 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHRNA1P02708 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
CHRNA1P02708 AL353803.4-201ENST00000565882 1934 ntBASIC24.22■■□□□ 1.47
CHRNA1P02708 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
CHRNA1P02708 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHRNA1P02708 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.22■■□□□ 1.47
CHRNA1P02708 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.22■■□□□ 1.47
CHRNA1P02708 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.22■■□□□ 1.47
CHRNA1P02708 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.21■■□□□ 1.47
CHRNA1P02708 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.21■■□□□ 1.47
CHRNA1P02708 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.21■■□□□ 1.47
CHRNA1P02708 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHRNA1P02708 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
CHRNA1P02708 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.2■■□□□ 1.47
CHRNA1P02708 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.2■■□□□ 1.47
CHRNA1P02708 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHRNA1P02708 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.2■■□□□ 1.46
CHRNA1P02708 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHRNA1P02708 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHRNA1P02708 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.2■■□□□ 1.46
CHRNA1P02708 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.2■■□□□ 1.46
CHRNA1P02708 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHRNA1P02708 ABCB10P4-201ENST00000566803 2184 ntBASIC24.2■■□□□ 1.46
CHRNA1P02708 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRNA1P02708 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHRNA1P02708 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRNA1P02708 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.19■■□□□ 1.46
CHRNA1P02708 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.19■■□□□ 1.46
CHRNA1P02708 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.19■■□□□ 1.46
CHRNA1P02708 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRNA1P02708 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
CHRNA1P02708 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHRNA1P02708 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.18■■□□□ 1.46
CHRNA1P02708 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHRNA1P02708 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CHRNA1P02708 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
CHRNA1P02708 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.18■■□□□ 1.46
CHRNA1P02708 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CHRNA1P02708 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHRNA1P02708 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.18■■□□□ 1.46
CHRNA1P02708 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
CHRNA1P02708 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.18■■□□□ 1.46
CHRNA1P02708 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms