Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH7O60245 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.05■□□□□ 0.96
PCDH7O60245 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH7O60245 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH7O60245 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PCDH7O60245 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PCDH7O60245 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
PCDH7O60245 AC242852.2-201ENST00000615738 1807 ntBASIC21.04■□□□□ 0.96
PCDH7O60245 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH7O60245 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH7O60245 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 LINC00526-201ENST00000581067 1875 ntBASIC21.03■□□□□ 0.96
PCDH7O60245 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH7O60245 AC087742.1-201ENST00000575880 1738 ntBASIC21.03■□□□□ 0.96
PCDH7O60245 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
PCDH7O60245 AC004687.1-201ENST00000579003 1625 ntBASIC21.03■□□□□ 0.96
PCDH7O60245 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.03■□□□□ 0.96
PCDH7O60245 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH7O60245 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH7O60245 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH7O60245 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
PCDH7O60245 AL356740.2-201ENST00000601559 647 ntBASIC21.02■□□□□ 0.96
PCDH7O60245 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH7O60245 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH7O60245 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH7O60245 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PCDH7O60245 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDH7O60245 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.02■□□□□ 0.96
PCDH7O60245 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH7O60245 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH7O60245 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PCDH7O60245 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.01■□□□□ 0.95
PCDH7O60245 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.01■□□□□ 0.95
PCDH7O60245 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH7O60245 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
PCDH7O60245 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21■□□□□ 0.95
PCDH7O60245 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
PCDH7O60245 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21■□□□□ 0.95
PCDH7O60245 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PCDH7O60245 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDH7O60245 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PCDH7O60245 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
PCDH7O60245 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCDH7O60245 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH7O60245 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PCDH7O60245 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PCDH7O60245 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH7O60245 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCDH7O60245 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.98■□□□□ 0.95
PCDH7O60245 MIR3621-201ENST00000580529 85 ntBASIC20.98■□□□□ 0.95
PCDH7O60245 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.98■□□□□ 0.95
PCDH7O60245 AC241377.3-202ENST00000626088 1088 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms