Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRBV6-4A0A1B0GX49 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 AL499627.2-201ENST00000606283 725 ntBASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRBV6-4A0A1B0GX49 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 LINC00526-201ENST00000581067 1875 ntBASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRBV6-4A0A1B0GX49 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 LINC01960-201ENST00000563759 1884 ntBASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 MIR3621-201ENST00000580529 85 ntBASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC087742.1-201ENST00000575880 1738 ntBASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRBV6-4A0A1B0GX49 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 GRAMD4P7-201ENST00000578182 1232 ntBASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 AC004687.1-201ENST00000579003 1625 ntBASIC15.52■□□□□ 0.08
TRBV6-4A0A1B0GX49 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV6-4A0A1B0GX49 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 AC092171.4-201ENST00000609130 632 ntBASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV6-4A0A1B0GX49 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV6-4A0A1B0GX49 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms