Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 PSME2P2-201ENST00000453033 700 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 RN7SL684P-201ENST00000465665 294 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 HINT1-204ENST00000506908 681 ntTSL 2 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC023051.2-201ENST00000541141 460 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC120498.7-201ENST00000562876 330 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 PRMT1P1-201ENST00000604252 1009 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC244097.1-201ENST00000621631 1216 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 AC104590.1-202ENST00000558368 1921 ntBASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC16.13■□□□□ 0.17
HMG20BQ9P0W2 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 Z82170.1-201ENST00000625081 3192 ntBASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AL450468.2-201ENST00000565955 1889 ntBASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 MIR324-201ENST00000362183 83 ntBASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AIG1-203ENST00000367596 559 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 AC012146.4-201ENST00000575546 271 ntBASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMG20BQ9P0W2 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 ZFP69B-201ENST00000361584 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AL356585.2-201ENST00000625078 2396 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 TPI1P3-201ENST00000335020 740 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AL356653.1-201ENST00000402743 360 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 RPSAP70-201ENST00000504462 864 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 BCRP4-201ENST00000506079 804 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 MIR2278-201ENST00000516344 96 ntBASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.11■□□□□ 0.17
HMG20BQ9P0W2 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms