Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AC092896.1-201ENST00000465850 380 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AC025594.1-201ENST00000469533 543 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 IGHEP2-201ENST00000519308 1256 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 PIGCP1-201ENST00000527583 895 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 HNRNPA1P16-201ENST00000575692 955 ntBASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
NPIPA3F8WFD2 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 PRICKLE1-216ENST00000640132 4278 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC002350.2-201ENST00000623894 1828 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 HLA-DMA-202ENST00000395303 1007 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 TUBB2BP1-201ENST00000404155 871 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 MPV17-209ENST00000405983 859 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AF274858.1-201ENST00000406288 372 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 SNORD23-201ENST00000408876 110 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 HNRNPA1P21-201ENST00000424115 961 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AL136084.1-201ENST00000449172 318 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC015818.1-201ENST00000451011 244 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 RN7SL134P-201ENST00000579756 303 ntBASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
NPIPA3F8WFD2 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms