Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 AC093326.1-201ENST00000444079 762 ntTSL 5 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 RBMX2P3-201ENST00000450122 957 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL728P-201ENST00000464718 300 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL79P-201ENST00000484117 290 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL234P-201ENST00000485574 295 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 GNGT2-204ENST00000511277 918 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 LMO3-228ENST00000541846 573 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 AC025031.2-201ENST00000550319 627 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 AC005381.1-201ENST00000593065 769 ntTSL 3 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 LINC02246-207ENST00000630354 524 ntTSL 5 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 MIR6511B2-201ENST00000636908 71 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 OR7E22P-202ENST00000641331 1154 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 OR7E22P-203ENST00000641370 1242 ntBASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 TOMM40L-202ENST00000367988 2708 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC19.78■□□□□ 0.76
RIMBP3Q9UFD9 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 POR-201ENST00000394893 2532 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 ACAT1-202ENST00000299355 1345 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 CASC4P1-201ENST00000456608 1312 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 GSTM2-201ENST00000241337 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 ZNF581-201ENST00000270451 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 GLULP4-201ENST00000324731 1122 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 C9orf85-201ENST00000334731 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 RPS27A-203ENST00000404735 796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AP000344.1-203ENST00000426024 163 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 SYNPR-205ENST00000465156 829 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 RN7SL766P-201ENST00000494719 309 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AL390726.2-201ENST00000504791 343 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 KBTBD11-OT1-201ENST00000518539 815 ntTSL 3 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AC007610.3-201ENST00000566879 934 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 ZNF581-204ENST00000588537 1100 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AL359747.1-202ENST00000606028 918 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 SEMA4G-212ENST00000613292 1171 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 DPCD-206ENST00000626968 541 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AC026271.4-201ENST00000578214 1833 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 CYP17A1-204ENST00000638190 1506 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 AC005682.1-201ENST00000452069 1467 ntBASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 LDAH-204ENST00000403006 1895 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.77■□□□□ 0.76
RIMBP3Q9UFD9 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIMBP3Q9UFD9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RIMBP3Q9UFD9 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC19.77■□□□□ 0.75
RIMBP3Q9UFD9 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AL512383.1-201ENST00000624175 2677 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AF241726.2-201ENST00000465127 954 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 LINC01213-202ENST00000498005 525 ntTSL 3 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AC108482.1-201ENST00000523413 722 ntTSL 5 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AP000812.3-201ENST00000544535 609 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 LINC01405-203ENST00000548368 705 ntTSL 3 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 JPT2-214ENST00000569765 782 ntTSL 2 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 RN7SL693P-201ENST00000579576 279 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AL355376.2-202ENST00000604686 241 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 Metazoa_SRP.72-201ENST00000617458 278 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 Z98752.4-201ENST00000635579 588 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 OTUD6B-AS1-202ENST00000524003 2171 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 FOXN3P1-201ENST00000325117 1480 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 FKBP4P2-201ENST00000598909 1371 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 OLFML3-201ENST00000320334 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AC104852.1-201ENST00000518921 1459 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 ZNF684-202ENST00000372697 1028 ntTSL 3 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 RPL23-204ENST00000394333 444 ntTSL 2 BASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 RPL23P8-201ENST00000405810 428 ntBASIC19.76■□□□□ 0.75
RIMBP3Q9UFD9 SNRPCP9-201ENST00000417250 207 ntBASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms