Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 AL133466.1-201ENST00000447582 150 ntBASIC14.35□□□□□ -0.11
SSR1P43307 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 MIR3677-201ENST00000578964 60 ntBASIC14.35□□□□□ -0.11
SSR1P43307 MIR4525-201ENST00000580000 75 ntBASIC14.35□□□□□ -0.11
SSR1P43307 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
SSR1P43307 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SSR1P43307 AC009145.4-201ENST00000625119 1294 ntBASIC14.35□□□□□ -0.11
SSR1P43307 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 AC022364.1-202ENST00000617468 2409 ntBASIC14.35□□□□□ -0.11
SSR1P43307 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC14.35□□□□□ -0.11
SSR1P43307 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SSR1P43307 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SSR1P43307 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SSR1P43307 SLC35B3-201ENST00000379660 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SSR1P43307 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 ODCP-201ENST00000459650 1639 ntBASIC14.34□□□□□ -0.11
SSR1P43307 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 OTOF-204ENST00000402415 5108 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 TEF-202ENST00000406644 4386 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSR1P43307 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 PYY2-201ENST00000315776 282 ntBASIC14.34□□□□□ -0.11
SSR1P43307 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 MIR557-201ENST00000385239 98 ntBASIC14.34□□□□□ -0.11
SSR1P43307 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SSR1P43307 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
SSR1P43307 GGTLC4P-201ENST00000402176 664 ntBASIC14.34□□□□□ -0.11
SSR1P43307 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.34□□□□□ -0.11
SSR1P43307 FTH1P22-201ENST00000456305 520 ntBASIC14.34□□□□□ -0.11
SSR1P43307 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.34□□□□□ -0.11
SSR1P43307 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.34□□□□□ -0.11
SSR1P43307 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 DRD3-201ENST00000295881 1541 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SSR1P43307 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 Z98257.2-202ENST00000641138 1548 ntBASIC14.34□□□□□ -0.11
SSR1P43307 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.34□□□□□ -0.11
SSR1P43307 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.34□□□□□ -0.11
SSR1P43307 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SSR1P43307 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSR1P43307 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SSR1P43307 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SSR1P43307 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SSR1P43307 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC14.33□□□□□ -0.11
SSR1P43307 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
SSR1P43307 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms