Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 KRT18P62-201ENST00000446618 1287 ntBASIC13.95□□□□□ -0.18
MMP13P45452 DPY19L2P5-201ENST00000456300 331 ntBASIC13.95□□□□□ -0.18
MMP13P45452 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.95□□□□□ -0.18
MMP13P45452 EEF1GP8-201ENST00000506566 1154 ntBASIC13.95□□□□□ -0.18
MMP13P45452 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 AC107464.3-201ENST00000609172 737 ntBASIC13.95□□□□□ -0.18
MMP13P45452 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC13.95□□□□□ -0.18
MMP13P45452 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.95□□□□□ -0.18
MMP13P45452 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 AL513497.1-201ENST00000624273 2083 ntBASIC13.95□□□□□ -0.18
MMP13P45452 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 LPO-204ENST00000543544 2350 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 TOX2-203ENST00000372999 2519 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.95□□□□□ -0.18
MMP13P45452 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
MMP13P45452 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 SCRN1-207ENST00000434476 1454 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 PI4KB-201ENST00000368872 3331 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 ACTBP14-201ENST00000411655 1089 ntBASIC13.94□□□□□ -0.18
MMP13P45452 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 RPL18AP3-201ENST00000462885 528 ntBASIC13.94□□□□□ -0.18
MMP13P45452 VENTXP3-201ENST00000546480 773 ntBASIC13.94□□□□□ -0.18
MMP13P45452 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC13.94□□□□□ -0.18
MMP13P45452 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.94□□□□□ -0.18
MMP13P45452 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC13.94□□□□□ -0.18
MMP13P45452 AC092171.5-201ENST00000608012 942 ntBASIC13.94□□□□□ -0.18
MMP13P45452 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC13.94□□□□□ -0.18
MMP13P45452 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
MMP13P45452 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 ABCB9-211ENST00000540285 3330 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
MMP13P45452 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
MMP13P45452 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
MMP13P45452 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
MMP13P45452 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC13.93□□□□□ -0.18
MMP13P45452 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MMP13P45452 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 HPSE2-201ENST00000370546 1849 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
MMP13P45452 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 ABCD1P4-201ENST00000399687 604 ntBASIC13.93□□□□□ -0.18
MMP13P45452 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
MMP13P45452 SAA2-206ENST00000530400 323 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms