Protein–RNA interactions for Protein: Q9QY31

Snai3, Zinc finger protein SNAI3, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai3Q9QY31 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Snai3Q9QY31 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Snai3Q9QY31 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.22□□□□□ -0.13
Snai3Q9QY31 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Snai3Q9QY31 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Snai3Q9QY31 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snai3Q9QY31 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snai3Q9QY31 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snai3Q9QY31 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Snai3Q9QY31 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.2□□□□□ -0.14
Snai3Q9QY31 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Mir6538-201ENSMUST00000183713 110 ntBASIC14.2□□□□□ -0.14
Snai3Q9QY31 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Snai3Q9QY31 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.19□□□□□ -0.14
Snai3Q9QY31 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Snai3Q9QY31 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.18□□□□□ -0.14
Snai3Q9QY31 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Snai3Q9QY31 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Snai3Q9QY31 Nsd1-203ENSMUST00000224156 1149 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms