Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 DUX4L19-201ENST00000557448 1267 ntBASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
UBQLN4Q9NRR5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 AC006455.2-201ENST00000429931 906 ntBASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.35■□□□□ 0.85
UBQLN4Q9NRR5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 AL136116.3-201ENST00000402907 1138 ntBASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 pRNA.6-201ENST00000610482 90 ntBASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 pRNA.5-201ENST00000612139 90 ntBASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 pRNA.11-201ENST00000618423 90 ntBASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 pRNA.13-201ENST00000619112 90 ntBASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
UBQLN4Q9NRR5 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 MIR3181-201ENST00000578512 73 ntBASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.33■□□□□ 0.85
UBQLN4Q9NRR5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 C1orf229-201ENST00000623686 2258 ntBASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 AC133561.1-201ENST00000568600 2415 ntBASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.84
UBQLN4Q9NRR5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 AC004687.1-201ENST00000579003 1625 ntBASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBQLN4Q9NRR5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 AC133637.1-201ENST00000624115 1537 ntBASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 AC008406.3-201ENST00000620001 1374 ntBASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBQLN4Q9NRR5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 SYT6-210ENST00000641643 1587 ntBASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 AL138724.1-201ENST00000606771 1088 ntBASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBQLN4Q9NRR5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBQLN4Q9NRR5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms