Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SLC52A3Q9NQ40 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.08■□□□□ 0.96
SLC52A3Q9NQ40 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.08■□□□□ 0.96
SLC52A3Q9NQ40 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC52A3Q9NQ40 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
SLC52A3Q9NQ40 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SLC52A3Q9NQ40 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 MIR4508-201ENST00000584178 70 ntBASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.05■□□□□ 0.96
SLC52A3Q9NQ40 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 AC103834.1-201ENST00000520383 144 ntBASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 AC026310.3-201ENST00000625186 2373 ntBASIC21.04■□□□□ 0.96
SLC52A3Q9NQ40 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 AL024507.2-201ENST00000606070 2574 ntBASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A3Q9NQ40 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 LINC01529-204ENST00000636474 1715 ntBASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A3Q9NQ40 AC010542.4-201ENST00000563151 1910 ntBASIC21.02■□□□□ 0.95
SLC52A3Q9NQ40 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A3Q9NQ40 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A3Q9NQ40 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 FP325331.1-202ENST00000623531 1380 ntBASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SLC52A3Q9NQ40 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 TSPY13P-201ENST00000338964 914 ntBASIC21■□□□□ 0.95
SLC52A3Q9NQ40 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A3Q9NQ40 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms