Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ZCCHC4Q9H5U6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 AC004448.1-201ENST00000458332 883 ntBASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ZCCHC4Q9H5U6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 FBXW4P1-201ENST00000426721 2239 ntBASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.42■□□□□ 0.7
ZCCHC4Q9H5U6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ZCCHC4Q9H5U6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 AC010980.1-201ENST00000587192 1142 ntBASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 AC080038.3-201ENST00000623346 1952 ntBASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ZCCHC4Q9H5U6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.39■□□□□ 0.7
ZCCHC4Q9H5U6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 TSPY13P-201ENST00000338964 914 ntBASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ZCCHC4Q9H5U6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ZCCHC4Q9H5U6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 AC087742.1-201ENST00000575880 1738 ntBASIC19.37■□□□□ 0.69
ZCCHC4Q9H5U6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 AC026310.3-201ENST00000625186 2373 ntBASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
ZCCHC4Q9H5U6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms