Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
DDX47Q9H0S4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX47Q9H0S4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.06■■□□□ 1.28
DDX47Q9H0S4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX47Q9H0S4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX47Q9H0S4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
DDX47Q9H0S4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 BHLHE23-202ENST00000612929 1109 ntBASIC23.05■■□□□ 1.28
DDX47Q9H0S4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC23.05■■□□□ 1.28
DDX47Q9H0S4 AC144652.1-201ENST00000609974 1624 ntBASIC23.04■■□□□ 1.28
DDX47Q9H0S4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
DDX47Q9H0S4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
DDX47Q9H0S4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
DDX47Q9H0S4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
DDX47Q9H0S4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 AL024507.2-201ENST00000606070 2574 ntBASIC23.02■■□□□ 1.28
DDX47Q9H0S4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.02■■□□□ 1.28
DDX47Q9H0S4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
DDX47Q9H0S4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
DDX47Q9H0S4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC23■■□□□ 1.27
DDX47Q9H0S4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
DDX47Q9H0S4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX47Q9H0S4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX47Q9H0S4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23■■□□□ 1.27
DDX47Q9H0S4 NTF6A-201ENST00000591175 560 ntBASIC23■■□□□ 1.27
DDX47Q9H0S4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23■■□□□ 1.27
DDX47Q9H0S4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX47Q9H0S4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
DDX47Q9H0S4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 ABHD17AP5-201ENST00000580133 923 ntBASIC22.98■■□□□ 1.27
DDX47Q9H0S4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 AC010980.1-201ENST00000587192 1142 ntBASIC22.98■■□□□ 1.27
DDX47Q9H0S4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX47Q9H0S4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 AC004987.1-201ENST00000428627 508 ntBASIC22.97■■□□□ 1.27
DDX47Q9H0S4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX47Q9H0S4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms