Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
SEH1LQ96EE3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 ALDH1A3-203ENST00000557963 1670 ntBASIC19.2■□□□□ 0.66
SEH1LQ96EE3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.2■□□□□ 0.66
SEH1LQ96EE3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SEH1LQ96EE3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SEH1LQ96EE3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SEH1LQ96EE3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 UNC93B8-201ENST00000511903 705 ntBASIC19.17■□□□□ 0.66
SEH1LQ96EE3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SEH1LQ96EE3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 GUSBP5-201ENST00000418136 578 ntBASIC19.16■□□□□ 0.66
SEH1LQ96EE3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.16■□□□□ 0.66
SEH1LQ96EE3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 AL024507.2-201ENST00000606070 2574 ntBASIC19.15■□□□□ 0.66
SEH1LQ96EE3 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.15■□□□□ 0.66
SEH1LQ96EE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SEH1LQ96EE3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms