Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 TERF1P2-201ENST00000583350 1212 ntBASIC19.3■□□□□ 0.68
LINC01560Q8TB33 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC01560Q8TB33 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LINC01560Q8TB33 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.28■□□□□ 0.68
LINC01560Q8TB33 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LINC01560Q8TB33 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 AC020928.2-201ENST00000588717 2197 ntBASIC19.27■□□□□ 0.68
LINC01560Q8TB33 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LINC01560Q8TB33 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01560Q8TB33 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LINC01560Q8TB33 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LINC01560Q8TB33 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LINC01560Q8TB33 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC01560Q8TB33 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.23■□□□□ 0.67
LINC01560Q8TB33 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms