Protein–RNA interactions for Protein: Q8CDT7

Cabcoco1, Ciliary-associated calcium-binding coiled-coil protein 1, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cabcoco1Q8CDT7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cabcoco1Q8CDT7 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cabcoco1Q8CDT7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Gm12366-201ENSMUST00000121722 873 ntBASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Gm5786-201ENSMUST00000085368 882 ntBASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cabcoco1Q8CDT7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cabcoco1Q8CDT7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cabcoco1Q8CDT7 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cabcoco1Q8CDT7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cabcoco1Q8CDT7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cabcoco1Q8CDT7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cabcoco1Q8CDT7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cabcoco1Q8CDT7 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cabcoco1Q8CDT7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cabcoco1Q8CDT7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cabcoco1Q8CDT7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cabcoco1Q8CDT7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms