Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Tsen54Q8C2A2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Tsen54Q8C2A2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Gm5812-201ENSMUST00000061073 957 ntBASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Tsen54Q8C2A2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Tsen54Q8C2A2 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Tsen54Q8C2A2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Tsen54Q8C2A2 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Tsen54Q8C2A2 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Tsen54Q8C2A2 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Tsen54Q8C2A2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms