Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 YGR069WYGR069W 336 nt6.34□□□□□ -1.39
CAF120P53836 ARP1YHR129C 1155 nt6.34□□□□□ -1.39
CAF120P53836 DSE2YHR143W 978 nt6.34□□□□□ -1.39
CAF120P53836 YJL169WYJL169W 369 nt6.34□□□□□ -1.39
CAF120P53836 YLR125WYLR125W 411 nt6.34□□□□□ -1.39
CAF120P53836 CUZ1YNL155W 825 nt6.34□□□□□ -1.39
CAF120P53836 SFM1YOR021C 642 nt6.34□□□□□ -1.39
CAF120P53836 CAF20YOR276W 486 nt6.34□□□□□ -1.39
CAF120P53836 CTF19YPL018W 1110 nt6.34□□□□□ -1.39
CAF120P53836 ALG2YGL065C 1512 nt6.34□□□□□ -1.39
CAF120P53836 FET3YMR058W 1911 nt6.33□□□□□ -1.4
CAF120P53836 GCN4YEL009C 846 nt6.33□□□□□ -1.4
CAF120P53836 YER046W-AYER046W-A 330 nt6.33□□□□□ -1.4
CAF120P53836 RPN11YFR004W 921 nt6.33□□□□□ -1.4
CAF120P53836 YGR045CYGR045C 363 nt6.33□□□□□ -1.4
CAF120P53836 PET54YGR222W 882 nt6.33□□□□□ -1.4
CAF120P53836 RPS20YHL015W 366 nt6.33□□□□□ -1.4
CAF120P53836 YHR125WYHR125W 306 nt6.33□□□□□ -1.4
CAF120P53836 KRE9YJL174W 831 nt6.33□□□□□ -1.4
CAF120P53836 VPS51YKR020W 495 nt6.33□□□□□ -1.4
CAF120P53836 RPC37YKR025W 849 nt6.33□□□□□ -1.4
CAF120P53836 CIN5YOR028C 888 nt6.33□□□□□ -1.4
CAF120P53836 IAH1YOR126C 717 nt6.33□□□□□ -1.4
CAF120P53836 MRPL37YBR268W 318 nt6.33□□□□□ -1.4
CAF120P53836 MKC7YDR144C 1791 nt6.33□□□□□ -1.4
CAF120P53836 FBP26YJL155C 1359 nt6.32□□□□□ -1.4
CAF120P53836 YMD8YML038C 1329 nt6.32□□□□□ -1.4
CAF120P53836 SUF5tG(CCC)O 72 nt6.32□□□□□ -1.4
CAF120P53836 YEL010WYEL010W 351 nt6.32□□□□□ -1.4
CAF120P53836 IES5YER092W 378 nt6.32□□□□□ -1.4
CAF120P53836 CAF16YFL028C 870 nt6.32□□□□□ -1.4
CAF120P53836 SOH1YGL127C 384 nt6.32□□□□□ -1.4
CAF120P53836 BUD32YGR262C 786 nt6.32□□□□□ -1.4
CAF120P53836 YHR137C-AYHR137C-A 651 nt6.32□□□□□ -1.4
CAF120P53836 CTF8YHR191C 402 nt6.32□□□□□ -1.4
CAF120P53836 YIL177W-AYIL177W-A 483 nt6.32□□□□□ -1.4
CAF120P53836 YJL225W-AYJL225W-A 483 nt6.32□□□□□ -1.4
CAF120P53836 YKL066WYKL066W 444 nt6.32□□□□□ -1.4
CAF120P53836 YPL197CYPL197C 414 nt6.32□□□□□ -1.4
CAF120P53836 SET4YJL105W 1683 nt6.32□□□□□ -1.4
CAF120P53836 MLF3YNL074C 1359 nt6.31□□□□□ -1.4
CAF120P53836 YJR061WYJR061W 2808 nt6.31□□□□□ -1.4
CAF120P53836 GLN3YER040W 2193 nt6.31□□□□□ -1.4
CAF120P53836 YPR204WYPR204W 3099 nt6.31□□□□□ -1.4
CAF120P53836 YDL032WYDL032W 312 nt6.31□□□□□ -1.4
CAF120P53836 COQ4YDR204W 1008 nt6.31□□□□□ -1.4
CAF120P53836 YHR213W-AYHR213W-A 234 nt6.31□□□□□ -1.4
CAF120P53836 YIL077CYIL077C 963 nt6.31□□□□□ -1.4
CAF120P53836 HRI1YLR301W 735 nt6.31□□□□□ -1.4
CAF120P53836 ASN1YPR145W 1719 nt6.3□□□□□ -1.4
CAF120P53836 FKH1YIL131C 1455 nt6.3□□□□□ -1.4
CAF120P53836 YDR271CYDR271C 372 nt6.3□□□□□ -1.4
CAF120P53836 FPR2YDR519W 408 nt6.3□□□□□ -1.4
CAF120P53836 SNO3YFL060C 669 nt6.3□□□□□ -1.4
CAF120P53836 HEM2YGL040C 1029 nt6.3□□□□□ -1.4
CAF120P53836 YGR149WYGR149W 1299 nt6.3□□□□□ -1.4
CAF120P53836 BET1YIL004C 429 nt6.3□□□□□ -1.4
CAF120P53836 SDP1YIL113W 630 nt6.3□□□□□ -1.4
CAF120P53836 DAN1YJR150C 897 nt6.3□□□□□ -1.4
CAF120P53836 GPX1YKL026C 504 nt6.3□□□□□ -1.4
CAF120P53836 FBA1YKL060C 1080 nt6.3□□□□□ -1.4
CAF120P53836 RPS31YLR167W 459 nt6.3□□□□□ -1.4
CAF120P53836 CTK3YML112W 891 nt6.3□□□□□ -1.4
CAF120P53836 SNO2YNL334C 669 nt6.3□□□□□ -1.4
CAF120P53836 YOR289WYOR289W 756 nt6.3□□□□□ -1.4
CAF120P53836 YPL250W-AYPL250W-A 288 nt6.3□□□□□ -1.4
CAF120P53836 YCL001W-AYCL001W-A 462 nt6.3□□□□□ -1.4
CAF120P53836 RVB2YPL235W 1416 nt6.3□□□□□ -1.4
CAF120P53836 AVT4YNL101W 2142 nt6.29□□□□□ -1.4
CAF120P53836 HMLALPHA1YCL066W 528 nt6.29□□□□□ -1.4
CAF120P53836 MATALPHA1YCR040W 528 nt6.29□□□□□ -1.4
CAF120P53836 GIT1YCR098C 1557 nt6.29□□□□□ -1.4
CAF120P53836 SLX5YDL013W 1860 nt6.29□□□□□ -1.4
CAF120P53836 MAM1YER106W 909 nt6.29□□□□□ -1.4
CAF120P53836 YGL015CYGL015C 393 nt6.29□□□□□ -1.4
CAF120P53836 YGL117WYGL117W 798 nt6.29□□□□□ -1.4
CAF120P53836 YGR064WYGR064W 369 nt6.29□□□□□ -1.4
CAF120P53836 FUR1YHR128W 651 nt6.29□□□□□ -1.4
CAF120P53836 TIM54YJL054W 1437 nt6.29□□□□□ -1.4
CAF120P53836 YJR146WYJR146W 354 nt6.29□□□□□ -1.4
CAF120P53836 YLR444CYLR444C 303 nt6.29□□□□□ -1.4
CAF120P53836 JLP2YMR132C 627 nt6.29□□□□□ -1.4
CAF120P53836 KSH1YNL024C-A 219 nt6.29□□□□□ -1.4
CAF120P53836 RPC19YNL113W 429 nt6.29□□□□□ -1.4
CAF120P53836 YNL144W-AYNL144W-A 84 nt6.29□□□□□ -1.4
CAF120P53836 YNL162W-AYNL162W-A 219 nt6.29□□□□□ -1.4
CAF120P53836 POP7YBR167C 423 nt6.29□□□□□ -1.4
CAF120P53836 MDM34YGL219C 1380 nt6.29□□□□□ -1.4
CAF120P53836 PRO2YOR323C 1371 nt6.29□□□□□ -1.4
CAF120P53836 RAD18YCR066W 1464 nt6.28□□□□□ -1.4
CAF120P53836 EXG1YLR300W 1347 nt6.28□□□□□ -1.4
CAF120P53836 PTC3YBL056W 1407 nt6.28□□□□□ -1.4
CAF120P53836 FAL1YDR021W 1200 nt6.28□□□□□ -1.4
CAF120P53836 tM(CAU)Q1tM(CAU)Q1 76 nt6.28□□□□□ -1.4
CAF120P53836 ASK1YKL052C 879 nt6.28□□□□□ -1.4
CAF120P53836 YLR126CYLR126C 756 nt6.28□□□□□ -1.4
CAF120P53836 COX5AYNL052W 462 nt6.28□□□□□ -1.4
CAF120P53836 ATX2YOR079C 942 nt6.28□□□□□ -1.4
CAF120P53836 IMA2YOL157C 1770 nt6.28□□□□□ -1.4
CAF120P53836 THI2YBR240C 1353 nt6.28□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 24.9 ms