Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.14■□□□□ 0.81
SftpbP50405 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.14■□□□□ 0.81
SftpbP50405 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SftpbP50405 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.13■□□□□ 0.81
SftpbP50405 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SftpbP50405 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.12■□□□□ 0.81
SftpbP50405 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
SftpbP50405 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SftpbP50405 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.12■□□□□ 0.81
SftpbP50405 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.12■□□□□ 0.81
SftpbP50405 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SftpbP50405 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SftpbP50405 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SftpbP50405 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SftpbP50405 Gm9870-201ENSMUST00000063874 645 ntBASIC20.11■□□□□ 0.81
SftpbP50405 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SftpbP50405 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SftpbP50405 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SftpbP50405 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SftpbP50405 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
SftpbP50405 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.1■□□□□ 0.81
SftpbP50405 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SftpbP50405 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.1■□□□□ 0.81
SftpbP50405 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
SftpbP50405 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.09■□□□□ 0.81
SftpbP50405 Mir6236-201ENSMUST00000184437 123 ntBASIC20.09■□□□□ 0.81
SftpbP50405 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SftpbP50405 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SftpbP50405 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.09■□□□□ 0.81
SftpbP50405 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SftpbP50405 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SftpbP50405 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SftpbP50405 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
SftpbP50405 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SftpbP50405 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.08■□□□□ 0.81
SftpbP50405 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.08■□□□□ 0.8
SftpbP50405 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SftpbP50405 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SftpbP50405 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Gm7417-201ENSMUST00000192950 473 ntBASIC20.07■□□□□ 0.8
SftpbP50405 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SftpbP50405 Gm43530-201ENSMUST00000195920 274 ntBASIC20.07■□□□□ 0.8
SftpbP50405 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SftpbP50405 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.07■□□□□ 0.8
SftpbP50405 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SftpbP50405 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.06■□□□□ 0.8
SftpbP50405 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.06■□□□□ 0.8
SftpbP50405 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SftpbP50405 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SftpbP50405 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SftpbP50405 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
SftpbP50405 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms