Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A6P48664 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A6P48664 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
SLC1A6P48664 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC1A6P48664 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC1A6P48664 MIR4281-201ENST00000580852 62 ntBASIC21.77■■□□□ 1.08
SLC1A6P48664 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.77■■□□□ 1.08
SLC1A6P48664 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC1A6P48664 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
SLC1A6P48664 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
SLC1A6P48664 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A6P48664 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 DUX4L18-201ENST00000553347 1267 ntBASIC21.76■■□□□ 1.07
SLC1A6P48664 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC1A6P48664 AL024507.2-201ENST00000606070 2574 ntBASIC21.76■■□□□ 1.07
SLC1A6P48664 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.76■■□□□ 1.07
SLC1A6P48664 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A6P48664 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SLC1A6P48664 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A6P48664 KRT18P24-201ENST00000344739 1156 ntBASIC21.75■■□□□ 1.07
SLC1A6P48664 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A6P48664 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC1A6P48664 AC144652.1-201ENST00000609974 1624 ntBASIC21.75■■□□□ 1.07
SLC1A6P48664 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC1A6P48664 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A6P48664 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SLC1A6P48664 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
SLC1A6P48664 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC1A6P48664 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC1A6P48664 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SLC1A6P48664 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
SLC1A6P48664 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC1A6P48664 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC1A6P48664 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 THA1P-201ENST00000590384 1145 ntBASIC21.74■■□□□ 1.07
SLC1A6P48664 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC1A6P48664 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SLC1A6P48664 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC1A6P48664 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC1A6P48664 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SLC1A6P48664 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC1A6P48664 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC1A6P48664 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SLC1A6P48664 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC1A6P48664 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC1A6P48664 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC1A6P48664 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC1A6P48664 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC1A6P48664 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC1A6P48664 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC1A6P48664 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SLC1A6P48664 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC1A6P48664 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A6P48664 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC1A6P48664 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A6P48664 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC1A6P48664 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A6P48664 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC1A6P48664 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A6P48664 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC1A6P48664 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A6P48664 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A6P48664 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC1A6P48664 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.69■■□□□ 1.06
SLC1A6P48664 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC1A6P48664 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC1A6P48664 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC1A6P48664 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
SLC1A6P48664 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms