Protein–RNA interactions for Protein: P42843

SKP2, F-box protein SKP2, yeast

Predictions only

Length 763 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	P42843	MCM2	YBL023C	2607 nt		4.83	□□□□□ -1.64
SKP2	P42843	KEX1	YGL203C	2190 nt		4.82	□□□□□ -1.64
SKP2	P42843	TYR1	YBR166C	1359 nt		4.82	□□□□□ -1.64
SKP2	P42843	UBX7	YBR273C	1311 nt		4.82	□□□□□ -1.64
SKP2	P42843	YHR182W	YHR182W	2358 nt		4.82	□□□□□ -1.64
SKP2	P42843	SSB2	YNL209W	1842 nt		4.82	□□□□□ -1.64
SKP2	P42843	MSS2	YDL107W	1056 nt		4.82	□□□□□ -1.64
SKP2	P42843	RCR2	YDR003W	633 nt		4.82	□□□□□ -1.64
SKP2	P42843	YGR269W	YGR269W	327 nt		4.82	□□□□□ -1.64
SKP2	P42843	UBC12	YLR306W	567 nt		4.82	□□□□□ -1.64
SKP2	P42843	QCR2	YPR191W	1107 nt		4.82	□□□□□ -1.64
SKP2	P42843	SHE3	YBR130C	1278 nt		4.82	□□□□□ -1.64
SKP2	P42843	GRX1	YCL035C	333 nt		4.82	□□□□□ -1.64
SKP2	P42843	RTC5	YOR118W	1704 nt		4.82	□□□□□ -1.64
SKP2	P42843	KGD1	YIL125W	3045 nt		4.82	□□□□□ -1.64
SKP2	P42843	RIT1	YMR283C	1542 nt		4.82	□□□□□ -1.64
SKP2	P42843	HRK1	YOR267C	2280 nt		4.81	□□□□□ -1.64
SKP2	P42843	TED1	YIL039W	1422 nt		4.81	□□□□□ -1.64
SKP2	P42843	MGS1	YNL218W	1764 nt		4.81	□□□□□ -1.64
SKP2	P42843	LAP3	YNL239W	1365 nt		4.81	□□□□□ -1.64
SKP2	P42843	TYW1	YPL207W	2433 nt		4.81	□□□□□ -1.64
SKP2	P42843	AIM6	YDL237W	1173 nt		4.81	□□□□□ -1.64
SKP2	P42843	RRG1	YDR065W	1098 nt		4.81	□□□□□ -1.64
SKP2	P42843	YDR124W	YDR124W	975 nt		4.81	□□□□□ -1.64
SKP2	P42843	SUT1	YGL162W	900 nt		4.81	□□□□□ -1.64
SKP2	P42843	MTM1	YGR257C	1101 nt		4.81	□□□□□ -1.64
SKP2	P42843	RPC17	YJL011C	486 nt		4.81	□□□□□ -1.64
SKP2	P42843	COA3	YJL062W-A	258 nt		4.81	□□□□□ -1.64
SKP2	P42843	ARC19	YKL013C	516 nt		4.81	□□□□□ -1.64
SKP2	P42843	ELO3	YLR372W	1038 nt		4.81	□□□□□ -1.64
SKP2	P42843	VPS71	YML041C	843 nt		4.81	□□□□□ -1.64
SKP2	P42843	TEX1	YNL253W	1269 nt		4.81	□□□□□ -1.64
SKP2	P42843	MRM1	YOR201C	1239 nt		4.81	□□□□□ -1.64
SKP2	P42843	RPN8	YOR261C	1017 nt		4.81	□□□□□ -1.64
SKP2	P42843	ATG29	YPL166W	642 nt		4.81	□□□□□ -1.64
SKP2	P42843	YBR219C	YBR219C	384 nt		4.81	□□□□□ -1.64
SKP2	P42843	OCT1	YKL134C	2319 nt		4.81	□□□□□ -1.64
SKP2	P42843	ORC6	YHR118C	1308 nt		4.8	□□□□□ -1.64
SKP2	P42843	SNA2	YDR525W-A	240 nt		4.8	□□□□□ -1.64
SKP2	P42843	YGR168C	YGR168C	1131 nt		4.8	□□□□□ -1.64
SKP2	P42843	DIA1	YMR316W	1011 nt		4.8	□□□□□ -1.64
SKP2	P42843	YBL094C	YBL094C	333 nt		4.8	□□□□□ -1.64
SKP2	P42843	COX11	YPL132W	903 nt		4.8	□□□□□ -1.64
SKP2	P42843	PRP19	YLL036C	1512 nt		4.8	□□□□□ -1.64
SKP2	P42843	CDC48	YDL126C	2508 nt		4.8	□□□□□ -1.64
SKP2	P42843	NOC4	YPR144C	1659 nt		4.8	□□□□□ -1.64
SKP2	P42843	STR2	YJR130C	1920 nt		4.8	□□□□□ -1.64
SKP2	P42843	KIN2	YLR096W	3444 nt		4.79	□□□□□ -1.64
SKP2	P42843	MSE1	YOL033W	1611 nt		4.79	□□□□□ -1.64
SKP2	P42843	ARG82	YDR173C	1068 nt		4.79	□□□□□ -1.64
SKP2	P42843	KEG1	YFR042W	603 nt		4.79	□□□□□ -1.64
SKP2	P42843	YLR169W	YLR169W	354 nt		4.79	□□□□□ -1.64
SKP2	P42843	RPS10B	YMR230W	318 nt		4.79	□□□□□ -1.64
SKP2	P42843	CMR3	YPR013C	954 nt		4.79	□□□□□ -1.64
SKP2	P42843	RVB1	YDR190C	1392 nt		4.78	□□□□□ -1.64
SKP2	P42843	BLM10	YFL007W	6432 nt		4.78	□□□□□ -1.64
SKP2	P42843	SAC1	YKL212W	1872 nt		4.78	□□□□□ -1.64
SKP2	P42843	MHF2	YDL160C-A	243 nt		4.78	□□□□□ -1.64
SKP2	P42843	YDR290W	YDR290W	330 nt		4.78	□□□□□ -1.64
SKP2	P42843	YFR035C	YFR035C	345 nt		4.78	□□□□□ -1.64
SKP2	P42843	YGR016W	YGR016W	573 nt		4.78	□□□□□ -1.64
SKP2	P42843	YAL016C-B	YAL016C-B	186 nt		4.78	□□□□□ -1.64
SKP2	P42843	UTP11	YKL099C	753 nt		4.78	□□□□□ -1.64
SKP2	P42843	TPP1	YMR156C	717 nt		4.78	□□□□□ -1.64
SKP2	P42843	YNR061C	YNR061C	660 nt		4.78	□□□□□ -1.64
SKP2	P42843	IAH1	YOR126C	717 nt		4.78	□□□□□ -1.64
SKP2	P42843	YPL168W	YPL168W	1293 nt		4.78	□□□□□ -1.64
SKP2	P42843	THS1	YIL078W	2205 nt		4.78	□□□□□ -1.64
SKP2	P42843	TRM13	YOL125W	1431 nt		4.78	□□□□□ -1.64
SKP2	P42843	STE7	YDL159W	1548 nt		4.77	□□□□□ -1.65
SKP2	P42843	PAL1	YDR348C	1500 nt		4.77	□□□□□ -1.65
SKP2	P42843	RRB1	YMR131C	1536 nt		4.77	□□□□□ -1.65
SKP2	P42843	SFI1	YLL003W	2841 nt		4.77	□□□□□ -1.65
SKP2	P42843	BUD26	YDR241W	288 nt		4.77	□□□□□ -1.65
SKP2	P42843	RNH202	YDR279W	1053 nt		4.77	□□□□□ -1.65
SKP2	P42843	MRPS35	YGR165W	1038 nt		4.77	□□□□□ -1.65
SKP2	P42843	GMH1	YKR030W	822 nt		4.77	□□□□□ -1.65
SKP2	P42843	SIC1	YLR079W	855 nt		4.77	□□□□□ -1.65
SKP2	P42843	YLR285C-A	YLR285C-A	171 nt		4.77	□□□□□ -1.65
SKP2	P42843	CPR3	YML078W	549 nt		4.77	□□□□□ -1.65
SKP2	P42843	AIM39	YOL053W	1188 nt		4.77	□□□□□ -1.65
SKP2	P42843	GAS4	YOL132W	1416 nt		4.77	□□□□□ -1.65
SKP2	P42843	RCK2	YLR248W	1833 nt		4.76	□□□□□ -1.65
SKP2	P42843	STD1	YOR047C	1335 nt		4.76	□□□□□ -1.65
SKP2	P42843	RTG3	YBL103C	1461 nt		4.76	□□□□□ -1.65
SKP2	P42843	MDL1	YLR188W	2088 nt		4.76	□□□□□ -1.65
SKP2	P42843	YCR085W	YCR085W	354 nt		4.76	□□□□□ -1.65
SKP2	P42843	PEX21	YGR239C	867 nt		4.76	□□□□□ -1.65
SKP2	P42843	RPL14A	YKL006W	417 nt		4.76	□□□□□ -1.65
SKP2	P42843	PTM1	YKL039W	1572 nt		4.76	□□□□□ -1.65
SKP2	P42843	YLR363W-A	YLR363W-A	258 nt		4.76	□□□□□ -1.65
SKP2	P42843	VPS21	YOR089C	633 nt		4.76	□□□□□ -1.65
SKP2	P42843	YJL206C	YJL206C	2277 nt		4.76	□□□□□ -1.65
SKP2	P42843	POL12	YBL035C	2118 nt		4.76	□□□□□ -1.65
SKP2	P42843	ADE6	YGR061C	4077 nt		4.76	□□□□□ -1.65
SKP2	P42843	SWC3	YAL011W	1878 nt		4.75	□□□□□ -1.65
SKP2	P42843	AAD4	YDL243C	990 nt		4.75	□□□□□ -1.65
SKP2	P42843	CDC12	YHR107C	1224 nt		4.75	□□□□□ -1.65
SKP2	P42843	COX3	Q0275	810 nt		4.75	□□□□□ -1.65
SKP2	P42843	CYC1	YJR048W	330 nt		4.75	□□□□□ -1.65

Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms