Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 tK(CUU)FtK(CUU)F 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)G1tK(CUU)G1 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)G2tK(CUU)G2 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)G3tK(CUU)G3 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)ItK(CUU)I 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)JtK(CUU)J 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)KtK(CUU)K 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)MtK(CUU)M 73 nt5.01□□□□□ -1.61
VPS8P39702 tK(CUU)PtK(CUU)P 73 nt5.01□□□□□ -1.61
VPS8P39702 ARI1YGL157W 1044 nt5.01□□□□□ -1.61
VPS8P39702 YGR204C-AYGR204C-A 114 nt5.01□□□□□ -1.61
VPS8P39702 DCG1YIR030C 735 nt5.01□□□□□ -1.61
VPS8P39702 HRT3YLR097C 1035 nt5.01□□□□□ -1.61
VPS8P39702 YLR157W-DYLR157W-D 213 nt5.01□□□□□ -1.61
VPS8P39702 ELO3YLR372W 1038 nt5.01□□□□□ -1.61
VPS8P39702 YIM1YMR152W 1098 nt5.01□□□□□ -1.61
VPS8P39702 YMR178WYMR178W 825 nt5.01□□□□□ -1.61
VPS8P39702 YNL181WYNL181W 1224 nt5.01□□□□□ -1.61
VPS8P39702 DCP1YOL149W 696 nt5.01□□□□□ -1.61
VPS8P39702 RER1YCL001W 567 nt5.01□□□□□ -1.61
VPS8P39702 TFA1YKL028W 1449 nt5□□□□□ -1.61
VPS8P39702 DOS2YDR068W 933 nt5□□□□□ -1.61
VPS8P39702 YGR269WYGR269W 327 nt5□□□□□ -1.61
VPS8P39702 YAL047W-AYAL047W-A 330 nt5□□□□□ -1.61
VPS8P39702 HYM1YKL189W 1200 nt5□□□□□ -1.61
VPS8P39702 CNB1YKL190W 528 nt5□□□□□ -1.61
VPS8P39702 MPD1YOR288C 957 nt5□□□□□ -1.61
VPS8P39702 SPO19YPL130W 672 nt5□□□□□ -1.61
VPS8P39702 SPN1YPR133C 1233 nt5□□□□□ -1.61
VPS8P39702 HSP82YPL240C 2130 nt5□□□□□ -1.61
VPS8P39702 PRD1YCL057W 2139 nt5□□□□□ -1.61
VPS8P39702 GDH2YDL215C 3279 nt4.99□□□□□ -1.61
VPS8P39702 ALG9YNL219C 1668 nt4.99□□□□□ -1.61
VPS8P39702 PRP19YLL036C 1512 nt4.99□□□□□ -1.61
VPS8P39702 YND1YER005W 1893 nt4.99□□□□□ -1.61
VPS8P39702 SBE2YDR351W 2595 nt4.99□□□□□ -1.61
VPS8P39702 PTC1YDL006W 846 nt4.99□□□□□ -1.61
VPS8P39702 PCL2YDL127W 927 nt4.99□□□□□ -1.61
VPS8P39702 SUR2YDR297W 1050 nt4.99□□□□□ -1.61
VPS8P39702 RRP17YDR412W 708 nt4.99□□□□□ -1.61
VPS8P39702 YER067C-AYER067C-A 324 nt4.99□□□□□ -1.61
VPS8P39702 tL(UAG)JtL(UAG)J 82 nt4.99□□□□□ -1.61
VPS8P39702 tL(UAG)L1tL(UAG)L1 82 nt4.99□□□□□ -1.61
VPS8P39702 tL(UAG)L2tL(UAG)L2 82 nt4.99□□□□□ -1.61
VPS8P39702 YGR168CYGR168C 1131 nt4.99□□□□□ -1.61
VPS8P39702 TYS1YGR185C 1185 nt4.99□□□□□ -1.61
VPS8P39702 YML090WYML090W 387 nt4.99□□□□□ -1.61
VPS8P39702 CMR3YPR013C 954 nt4.99□□□□□ -1.61
VPS8P39702 OAF1YAL051W 3144 nt4.99□□□□□ -1.61
VPS8P39702 ENT1YDL161W 1365 nt4.99□□□□□ -1.61
VPS8P39702 ZPR1YGR211W 1461 nt4.99□□□□□ -1.61
VPS8P39702 YMR221CYMR221C 1515 nt4.98□□□□□ -1.61
VPS8P39702 KEX1YGL203C 2190 nt4.98□□□□□ -1.61
VPS8P39702 ABF1YKL112W 2196 nt4.98□□□□□ -1.61
VPS8P39702 SHR3YDL212W 633 nt4.98□□□□□ -1.61
VPS8P39702 YDR509WYDR509W 348 nt4.98□□□□□ -1.61
VPS8P39702 YDR545C-AYDR545C-A 480 nt4.98□□□□□ -1.61
VPS8P39702 YEL077W-AYEL077W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YER190C-BYER190C-B 483 nt4.98□□□□□ -1.61
VPS8P39702 YFL068WYFL068W 483 nt4.98□□□□□ -1.61
VPS8P39702 YGR296C-BYGR296C-B 483 nt4.98□□□□□ -1.61
VPS8P39702 YHL050W-AYHL050W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 PPE1YHR075C 1203 nt4.98□□□□□ -1.61
VPS8P39702 YHR219C-AYHR219C-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YIL177W-AYIL177W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YJL225W-AYJL225W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YLL066W-AYLL066W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YLL067W-AYLL067W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 SPC3YLR066W 555 nt4.98□□□□□ -1.61
VPS8P39702 UPS2YLR168C 693 nt4.98□□□□□ -1.61
VPS8P39702 YLR466C-AYLR466C-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YLR467C-AYLR467C-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YML133W-BYML133W-B 483 nt4.98□□□□□ -1.61
VPS8P39702 YNL339W-BYNL339W-B 483 nt4.98□□□□□ -1.61
VPS8P39702 YBL113W-AYBL113W-A 483 nt4.98□□□□□ -1.61
VPS8P39702 YOR396C-AYOR396C-A 483 nt4.98□□□□□ -1.61
VPS8P39702 SET6YPL165C 1122 nt4.98□□□□□ -1.61
VPS8P39702 YPL283W-BYPL283W-B 483 nt4.98□□□□□ -1.61
VPS8P39702 YPR204C-AYPR204C-A 483 nt4.98□□□□□ -1.61
VPS8P39702 NGL3YML118W 1518 nt4.97□□□□□ -1.61
VPS8P39702 MGR3YMR115W 1506 nt4.97□□□□□ -1.61
VPS8P39702 TGL4YKR089C 2733 nt4.97□□□□□ -1.61
VPS8P39702 SWC3YAL011W 1878 nt4.97□□□□□ -1.61
VPS8P39702 MRPL32YCR003W 552 nt4.97□□□□□ -1.61
VPS8P39702 snR63snR63 255 nt4.97□□□□□ -1.61
VPS8P39702 BUD30YDL151C 582 nt4.97□□□□□ -1.61
VPS8P39702 YDR274CYDR274C 372 nt4.97□□□□□ -1.61
VPS8P39702 YGL193CYGL193C 312 nt4.97□□□□□ -1.61
VPS8P39702 POP6YGR030C 477 nt4.97□□□□□ -1.61
VPS8P39702 LAC1YKL008C 1257 nt4.97□□□□□ -1.61
VPS8P39702 EMG1YLR186W 759 nt4.97□□□□□ -1.61
VPS8P39702 TFB6YOR352W 1032 nt4.97□□□□□ -1.61
VPS8P39702 TRM13YOL125W 1431 nt4.97□□□□□ -1.61
VPS8P39702 NUP2YLR335W 2163 nt4.97□□□□□ -1.61
VPS8P39702 GPB1YOR371C 2694 nt4.96□□□□□ -1.62
VPS8P39702 FBP26YJL155C 1359 nt4.96□□□□□ -1.62
VPS8P39702 STR2YJR130C 1920 nt4.96□□□□□ -1.62
VPS8P39702 BBC1YJL020C 3474 nt4.96□□□□□ -1.62
VPS8P39702 YCR016WYCR016W 873 nt4.96□□□□□ -1.62
VPS8P39702 YHL049CYHL049C 816 nt4.96□□□□□ -1.62
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms