Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TNFP01375 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TNFP01375 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TNFP01375 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TNFP01375 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
TNFP01375 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TNFP01375 AC004687.1-201ENST00000579003 1625 ntBASIC21.71■■□□□ 1.07
TNFP01375 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFP01375 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFP01375 AC104564.3-201ENST00000582367 638 ntBASIC21.71■■□□□ 1.07
TNFP01375 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.71■■□□□ 1.07
TNFP01375 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.71■■□□□ 1.07
TNFP01375 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.71■■□□□ 1.07
TNFP01375 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TNFP01375 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TNFP01375 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.7■■□□□ 1.06
TNFP01375 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.7■■□□□ 1.06
TNFP01375 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFP01375 AC012414.1-201ENST00000556676 535 ntBASIC21.7■■□□□ 1.06
TNFP01375 AL354811.1-201ENST00000610286 706 ntBASIC21.7■■□□□ 1.06
TNFP01375 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.7■■□□□ 1.06
TNFP01375 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TNFP01375 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
TNFP01375 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.69■■□□□ 1.06
TNFP01375 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFP01375 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFP01375 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.69■■□□□ 1.06
TNFP01375 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TNFP01375 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.69■■□□□ 1.06
TNFP01375 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TNFP01375 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
TNFP01375 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TNFP01375 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFP01375 YBX1P1-201ENST00000445822 960 ntBASIC21.68■■□□□ 1.06
TNFP01375 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
TNFP01375 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.68■■□□□ 1.06
TNFP01375 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFP01375 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TNFP01375 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.68■■□□□ 1.06
TNFP01375 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
TNFP01375 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TNFP01375 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFP01375 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TNFP01375 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TNFP01375 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TNFP01375 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
TNFP01375 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFP01375 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TNFP01375 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 AC027612.3-201ENST00000413684 1047 ntBASIC21.67■■□□□ 1.06
TNFP01375 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.67■■□□□ 1.06
TNFP01375 AL162430.1-201ENST00000480705 870 ntBASIC21.67■■□□□ 1.06
TNFP01375 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.67■■□□□ 1.06
TNFP01375 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TNFP01375 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.66■■□□□ 1.06
TNFP01375 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TNFP01375 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 AC034268.1-201ENST00000441047 882 ntBASIC21.66■■□□□ 1.06
TNFP01375 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.66■■□□□ 1.06
TNFP01375 MIR6084-201ENST00000622012 110 ntBASIC21.66■■□□□ 1.06
TNFP01375 AC068587.7-201ENST00000641602 218 ntBASIC21.66■■□□□ 1.06
TNFP01375 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TNFP01375 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TNFP01375 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TNFP01375 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TNFP01375 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFP01375 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.65■■□□□ 1.06
TNFP01375 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.65■■□□□ 1.06
TNFP01375 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.65■■□□□ 1.06
TNFP01375 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TNFP01375 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNFP01375 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNFP01375 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TNFP01375 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.64■■□□□ 1.05
TNFP01375 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TNFP01375 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms