Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TGFAP01135 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.27■□□□□ 0.52
TGFAP01135 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
TGFAP01135 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.27■□□□□ 0.52
TGFAP01135 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 ID1-201ENST00000376105 1233 ntBASIC18.27■□□□□ 0.52
TGFAP01135 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TGFAP01135 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.27■□□□□ 0.52
TGFAP01135 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TGFAP01135 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.27■□□□□ 0.52
TGFAP01135 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.27■□□□□ 0.52
TGFAP01135 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TGFAP01135 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TGFAP01135 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TGFAP01135 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TGFAP01135 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
TGFAP01135 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TGFAP01135 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.26■□□□□ 0.51
TGFAP01135 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TGFAP01135 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TGFAP01135 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.26■□□□□ 0.51
TGFAP01135 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TGFAP01135 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.26■□□□□ 0.51
TGFAP01135 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TGFAP01135 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TGFAP01135 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TGFAP01135 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.26■□□□□ 0.51
TGFAP01135 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TGFAP01135 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.26■□□□□ 0.51
TGFAP01135 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.25■□□□□ 0.51
TGFAP01135 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.25■□□□□ 0.51
TGFAP01135 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.25■□□□□ 0.51
TGFAP01135 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.25■□□□□ 0.51
TGFAP01135 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.25■□□□□ 0.51
TGFAP01135 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TGFAP01135 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TGFAP01135 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TGFAP01135 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TGFAP01135 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TGFAP01135 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TGFAP01135 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TGFAP01135 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TGFAP01135 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.24■□□□□ 0.51
TGFAP01135 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.24■□□□□ 0.51
TGFAP01135 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.24■□□□□ 0.51
TGFAP01135 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TGFAP01135 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TGFAP01135 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.23■□□□□ 0.51
TGFAP01135 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TGFAP01135 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TGFAP01135 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TGFAP01135 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.23■□□□□ 0.51
TGFAP01135 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.23■□□□□ 0.51
TGFAP01135 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.23■□□□□ 0.51
TGFAP01135 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.23■□□□□ 0.51
TGFAP01135 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.23■□□□□ 0.51
TGFAP01135 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.23■□□□□ 0.51
TGFAP01135 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TGFAP01135 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TGFAP01135 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.23■□□□□ 0.51
TGFAP01135 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.22■□□□□ 0.51
TGFAP01135 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.22■□□□□ 0.51
TGFAP01135 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TGFAP01135 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.22■□□□□ 0.51
TGFAP01135 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.22■□□□□ 0.51
TGFAP01135 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TGFAP01135 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TGFAP01135 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TGFAP01135 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.21■□□□□ 0.51
TGFAP01135 AC016769.1-201ENST00000409132 1010 ntBASIC18.21■□□□□ 0.51
TGFAP01135 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.21■□□□□ 0.51
TGFAP01135 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.21■□□□□ 0.51
TGFAP01135 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms