Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
GMDSO60547 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 AC092028.1-203ENST00000608262 953 ntBASIC19.48■□□□□ 0.71
GMDSO60547 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
GMDSO60547 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
GMDSO60547 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
GMDSO60547 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
GMDSO60547 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
GMDSO60547 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.47■□□□□ 0.71
GMDSO60547 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
GMDSO60547 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
GMDSO60547 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GMDSO60547 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
GMDSO60547 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.47■□□□□ 0.71
GMDSO60547 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
GMDSO60547 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
GMDSO60547 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GMDSO60547 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
GMDSO60547 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
GMDSO60547 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.46■□□□□ 0.71
GMDSO60547 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.46■□□□□ 0.71
GMDSO60547 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.46■□□□□ 0.71
GMDSO60547 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.46■□□□□ 0.71
GMDSO60547 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
GMDSO60547 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GMDSO60547 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
GMDSO60547 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
GMDSO60547 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.45■□□□□ 0.7
GMDSO60547 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.45■□□□□ 0.7
GMDSO60547 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.45■□□□□ 0.7
GMDSO60547 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.45■□□□□ 0.7
GMDSO60547 MIR6722-201ENST00000617286 78 ntBASIC19.45■□□□□ 0.7
GMDSO60547 AL035685.1-201ENST00000636663 812 ntBASIC19.45■□□□□ 0.7
GMDSO60547 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
GMDSO60547 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GMDSO60547 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.45■□□□□ 0.7
GMDSO60547 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.44■□□□□ 0.7
GMDSO60547 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.44■□□□□ 0.7
GMDSO60547 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.44■□□□□ 0.7
GMDSO60547 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.44■□□□□ 0.7
GMDSO60547 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
GMDSO60547 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GMDSO60547 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.43■□□□□ 0.7
GMDSO60547 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.43■□□□□ 0.7
GMDSO60547 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.43■□□□□ 0.7
GMDSO60547 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.43■□□□□ 0.7
GMDSO60547 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GMDSO60547 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GMDSO60547 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.43■□□□□ 0.7
GMDSO60547 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms