Protein–RNA interactions for Protein: O55176

Pja1, E3 ubiquitin-protein ligase Praja-1, mousemouse

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pja1O55176 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.87■□□□□ 0.93
Pja1O55176 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Pja1O55176 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Pja1O55176 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Pja1O55176 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pja1O55176 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.86■□□□□ 0.93
Pja1O55176 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pja1O55176 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Pja1O55176 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Pja1O55176 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pja1O55176 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Pja1O55176 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Pja1O55176 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pja1O55176 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pja1O55176 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.84■□□□□ 0.93
Pja1O55176 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pja1O55176 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pja1O55176 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pja1O55176 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pja1O55176 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.83■□□□□ 0.93
Pja1O55176 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.83■□□□□ 0.93
Pja1O55176 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pja1O55176 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Pja1O55176 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.83■□□□□ 0.92
Pja1O55176 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pja1O55176 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.81■□□□□ 0.92
Pja1O55176 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Pja1O55176 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pja1O55176 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pja1O55176 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.8■□□□□ 0.92
Pja1O55176 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pja1O55176 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.8■□□□□ 0.92
Pja1O55176 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Pja1O55176 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pja1O55176 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pja1O55176 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pja1O55176 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Pja1O55176 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pja1O55176 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pja1O55176 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pja1O55176 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.79■□□□□ 0.92
Pja1O55176 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pja1O55176 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pja1O55176 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.78■□□□□ 0.92
Pja1O55176 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pja1O55176 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pja1O55176 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pja1O55176 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pja1O55176 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pja1O55176 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pja1O55176 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Pja1O55176 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.77■□□□□ 0.92
Pja1O55176 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.77■□□□□ 0.91
Pja1O55176 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pja1O55176 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Pja1O55176 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pja1O55176 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pja1O55176 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms