Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 MIR4281-201ENST00000580852 62 ntBASIC20.46■□□□□ 0.87
TNFRSF11BO00300 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.46■□□□□ 0.87
TNFRSF11BO00300 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
TNFRSF11BO00300 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
TNFRSF11BO00300 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 THA1P-201ENST00000590384 1145 ntBASIC20.45■□□□□ 0.86
TNFRSF11BO00300 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TNFRSF11BO00300 AC087742.1-201ENST00000575880 1738 ntBASIC20.44■□□□□ 0.86
TNFRSF11BO00300 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 FBXW4P1-201ENST00000426721 2239 ntBASIC20.44■□□□□ 0.86
TNFRSF11BO00300 KRT18P24-201ENST00000344739 1156 ntBASIC20.44■□□□□ 0.86
TNFRSF11BO00300 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TNFRSF11BO00300 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TNFRSF11BO00300 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 BHLHE23-202ENST00000612929 1109 ntBASIC20.42■□□□□ 0.86
TNFRSF11BO00300 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TNFRSF11BO00300 AC144652.1-201ENST00000609974 1624 ntBASIC20.42■□□□□ 0.86
TNFRSF11BO00300 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TNFRSF11BO00300 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TNFRSF11BO00300 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TNFRSF11BO00300 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TNFRSF11BO00300 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms