Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 RN7SKP109-201ENST00000410592 316 ntBASIC13.53□□□□□ -0.24
APOA4P06727 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 RGS5-216ENST00000449680 788 ntTSL 3 BASIC13.53□□□□□ -0.24
APOA4P06727 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APOA4P06727 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.53□□□□□ -0.24
APOA4P06727 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC13.53□□□□□ -0.24
APOA4P06727 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.53□□□□□ -0.24
APOA4P06727 AC093300.1-201ENST00000510368 1201 ntBASIC13.53□□□□□ -0.24
APOA4P06727 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.53□□□□□ -0.24
APOA4P06727 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC13.53□□□□□ -0.24
APOA4P06727 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 AL591926.3-201ENST00000611630 238 ntBASIC13.53□□□□□ -0.24
APOA4P06727 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APOA4P06727 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.53□□□□□ -0.24
APOA4P06727 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
APOA4P06727 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APOA4P06727 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
APOA4P06727 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.52□□□□□ -0.24
APOA4P06727 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.52□□□□□ -0.24
APOA4P06727 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
APOA4P06727 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.52□□□□□ -0.24
APOA4P06727 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APOA4P06727 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.52□□□□□ -0.25
APOA4P06727 CELP-201ENST00000411440 1249 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 OR52M2P-201ENST00000414298 959 ntBASIC13.52□□□□□ -0.25
APOA4P06727 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 STK24P1-201ENST00000455035 1291 ntBASIC13.52□□□□□ -0.25
APOA4P06727 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.52□□□□□ -0.25
APOA4P06727 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.52□□□□□ -0.25
APOA4P06727 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 AL031713.1-201ENST00000564813 661 ntBASIC13.52□□□□□ -0.25
APOA4P06727 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 AL009176.1-201ENST00000607876 650 ntBASIC13.52□□□□□ -0.25
APOA4P06727 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 MAX-212ENST00000555932 1673 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 IKZF1-211ENST00000440768 5511 ntTSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 HOXA1-202ENST00000355633 2016 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 AC091181.1-201ENST00000623762 2098 ntBASIC13.52□□□□□ -0.25
APOA4P06727 TRMT1-202ENST00000357720 2142 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 ZNF568-201ENST00000333987 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.52□□□□□ -0.25
APOA4P06727 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
APOA4P06727 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APOA4P06727 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms