Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CDC42BPAQ5VT25 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 TBC1D3P3-201ENST00000342824 1080 ntBASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ALMS1P1-201ENST00000428767 921 ntBASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AC092100.1-201ENST00000435148 702 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 INO80C-203ENST00000441607 904 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AP3M2-205ENST00000517922 1094 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 DNM1P50-201ENST00000565767 508 ntBASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AC127537.3-201ENST00000566532 749 ntBASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ARHGEF9-235ENST00000637723 2146 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 SERTAD3-202ENST00000392028 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 SMUG1-AS1-201ENST00000634796 1734 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC19.43■□□□□ 0.7
CDC42BPAQ5VT25 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 FOLR1-201ENST00000312293 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AP001107.8-201ENST00000530805 479 ntTSL 3 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AC084064.1-201ENST00000569938 419 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 MIR3177-201ENST00000578255 82 ntBASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AC007728.3-201ENST00000602304 746 ntBASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 PRSS2-205ENST00000632998 817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AK4P5-201ENST00000404520 634 ntBASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CTSLP1-201ENST00000457530 1002 ntBASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 AP003170.2-201ENST00000544730 786 ntBASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDC42BPAQ5VT25 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC069061.4-201ENST00000581294 1347 ntBASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 KRTAP12-4-201ENST00000391618 447 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC022121.1-201ENST00000484584 579 ntBASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC004702.1-201ENST00000580225 195 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 MEG8_2.1-201ENST00000610604 122 ntBASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDC42BPAQ5VT25 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms