Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.06□□□□□ -0.48
APOC1P02654 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
APOC1P02654 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 AP002008.2-201ENST00000635926 4870 ntBASIC12.06□□□□□ -0.48
APOC1P02654 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AC138028.6-201ENST00000616106 1482 ntBASIC12.06□□□□□ -0.48
APOC1P02654 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.06□□□□□ -0.48
APOC1P02654 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.06□□□□□ -0.48
APOC1P02654 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
APOC1P02654 DDC-204ENST00000426377 1700 ntTSL 3 BASIC12.06□□□□□ -0.48
APOC1P02654 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 PCDHGA6-201ENST00000517434 4775 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
APOC1P02654 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 MIR769-201ENST00000390225 118 ntBASIC12.05□□□□□ -0.48
APOC1P02654 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC1P02654 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 AL353637.1-201ENST00000451571 732 ntBASIC12.05□□□□□ -0.48
APOC1P02654 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
APOC1P02654 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.05□□□□□ -0.48
APOC1P02654 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 NDUFV2P1-201ENST00000596415 907 ntBASIC12.05□□□□□ -0.48
APOC1P02654 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 AC022400.8-201ENST00000623453 3599 ntBASIC12.05□□□□□ -0.48
APOC1P02654 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
APOC1P02654 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.05□□□□□ -0.48
APOC1P02654 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC12.05□□□□□ -0.48
APOC1P02654 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
APOC1P02654 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
APOC1P02654 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms