Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 OR10N1P-201ENST00000392758 869 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
ZIC3O60481 ZNF877P-201ENST00000437614 612 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 HINT1-204ENST00000506908 681 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 SLC25A51P3-201ENST00000521814 889 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 FAM86B3P-203ENST00000523992 854 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 RN7SL605P-201ENST00000577229 281 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 MIR5091-201ENST00000578707 93 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 THY1-209ENST00000580275 578 ntTSL 3 BASIC12.09□□□□□ -0.47
ZIC3O60481 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.09□□□□□ -0.47
ZIC3O60481 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 ACER1-201ENST00000301452 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ZIC3O60481 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
ZIC3O60481 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ZIC3O60481 TCAF1P1-201ENST00000414990 2232 ntBASIC12.09□□□□□ -0.47
ZIC3O60481 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
ZIC3O60481 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ZIC3O60481 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 AC004241.5-201ENST00000623870 2448 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 SLC25A5-201ENST00000317881 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.08□□□□□ -0.48
ZIC3O60481 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.08□□□□□ -0.48
ZIC3O60481 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 MIR566-201ENST00000385187 94 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 AC010086.2-201ENST00000428616 226 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 KRT17P4-201ENST00000429445 819 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 IGHVII-33-1-201ENST00000524010 280 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 PHBP18-201ENST00000546648 813 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 AC244250.3-201ENST00000620749 366 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 AC138466.4-201ENST00000623965 852 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 AC139713.2-207ENST00000641556 1292 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 MRFAP1L1-201ENST00000320848 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 KRT18P40-201ENST00000599859 1571 ntBASIC12.08□□□□□ -0.48
ZIC3O60481 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 ACKR1-202ENST00000368122 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 AS3MT-202ENST00000615257 1723 ntTSL 5 BASIC12.08□□□□□ -0.48
ZIC3O60481 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ZIC3O60481 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ZIC3O60481 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms