Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 AC012513.1-201ENST00000417481 784 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.63□□□□□ -0.39
HPS1Q92902 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC12.63□□□□□ -0.39
HPS1Q92902 COX5BP1-201ENST00000507622 393 ntBASIC12.63□□□□□ -0.39
HPS1Q92902 AC126915.1-201ENST00000522847 1038 ntBASIC12.63□□□□□ -0.39
HPS1Q92902 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.63□□□□□ -0.39
HPS1Q92902 AC105430.1-202ENST00000567477 483 ntTSL 3 BASIC12.63□□□□□ -0.39
HPS1Q92902 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.63□□□□□ -0.39
HPS1Q92902 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.63□□□□□ -0.39
HPS1Q92902 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC12.63□□□□□ -0.39
HPS1Q92902 RN7SL713P-201ENST00000582127 302 ntBASIC12.63□□□□□ -0.39
HPS1Q92902 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 OR10B1P-201ENST00000601666 907 ntBASIC12.63□□□□□ -0.39
HPS1Q92902 AC138696.2-201ENST00000607376 223 ntBASIC12.63□□□□□ -0.39
HPS1Q92902 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.63□□□□□ -0.39
HPS1Q92902 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
HPS1Q92902 C1QTNF6-201ENST00000337843 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
HPS1Q92902 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
HPS1Q92902 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.63□□□□□ -0.39
HPS1Q92902 MFSD8-213ENST00000641134 1327 ntBASIC12.62□□□□□ -0.39
HPS1Q92902 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 C17orf53-202ENST00000319977 2725 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
HPS1Q92902 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 H3F3A-203ENST00000366815 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HPS1Q92902 HSPB1P2-201ENST00000448722 546 ntBASIC12.62□□□□□ -0.39
HPS1Q92902 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC12.62□□□□□ -0.39
HPS1Q92902 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.62□□□□□ -0.39
HPS1Q92902 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.62□□□□□ -0.39
HPS1Q92902 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC12.62□□□□□ -0.39
HPS1Q92902 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC12.62□□□□□ -0.39
HPS1Q92902 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.62□□□□□ -0.39
HPS1Q92902 AC009955.4-201ENST00000597192 544 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms