Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
EXOSC1Q9Y3B2 FBXW4P1-201ENST00000426721 2239 ntBASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
EXOSC1Q9Y3B2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
EXOSC1Q9Y3B2 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
EXOSC1Q9Y3B2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
EXOSC1Q9Y3B2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
EXOSC1Q9Y3B2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.83■□□□□ 0.76
EXOSC1Q9Y3B2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
EXOSC1Q9Y3B2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
EXOSC1Q9Y3B2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
EXOSC1Q9Y3B2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
EXOSC1Q9Y3B2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 AC087742.1-201ENST00000575880 1738 ntBASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 DUX4L9-201ENST00000449051 1259 ntBASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
EXOSC1Q9Y3B2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
EXOSC1Q9Y3B2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.8■□□□□ 0.76
EXOSC1Q9Y3B2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms