Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 DUX4L29-201ENST00000425409 679 ntBASIC18.54■□□□□ 0.56
MBD2Q9UBB5 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 AC044849.2-201ENST00000606596 710 ntBASIC18.54■□□□□ 0.56
MBD2Q9UBB5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD2Q9UBB5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 AC126177.7-201ENST00000547904 679 ntBASIC18.53■□□□□ 0.56
MBD2Q9UBB5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD2Q9UBB5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 AC092053.2-201ENST00000640557 1818 ntBASIC18.52■□□□□ 0.56
MBD2Q9UBB5 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 HLA-V-202ENST00000446817 847 ntBASIC18.52■□□□□ 0.56
MBD2Q9UBB5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
MBD2Q9UBB5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MBD2Q9UBB5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
MBD2Q9UBB5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
MBD2Q9UBB5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 AP006261.1-201ENST00000584783 668 ntBASIC18.51■□□□□ 0.55
MBD2Q9UBB5 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD2Q9UBB5 AC073130.3-201ENST00000624389 2278 ntBASIC18.51■□□□□ 0.55
MBD2Q9UBB5 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 AC139530.1-201ENST00000575312 1977 ntBASIC18.5■□□□□ 0.55
MBD2Q9UBB5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD2Q9UBB5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L13-201ENST00000554103 1267 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L15-201ENST00000611059 1267 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L23-201ENST00000615195 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L24-201ENST00000617576 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L22-201ENST00000618238 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L20-201ENST00000619712 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L21-201ENST00000622058 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L10-201ENST00000622460 1267 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 DUX4L25-201ENST00000624915 1269 ntBASIC18.49■□□□□ 0.55
MBD2Q9UBB5 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD2Q9UBB5 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms