Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 MIR939-201ENST00000401314 82 ntBASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 AP001330.3-201ENST00000520123 633 ntBASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
ARHGEF4Q9NR80 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 AC105265.2-201ENST00000467189 838 ntBASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
ARHGEF4Q9NR80 C17orf82-201ENST00000623772 1530 ntBASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
ARHGEF4Q9NR80 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 RARRES2P6-201ENST00000567333 442 ntBASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.28■■□□□ 1.32
ARHGEF4Q9NR80 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 AC091305.1-201ENST00000479476 895 ntBASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 AL138724.1-201ENST00000606771 1088 ntBASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
ARHGEF4Q9NR80 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 AC011298.3-201ENST00000615796 283 ntBASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 AC241377.3-202ENST00000626088 1088 ntBASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 AC241585.3-202ENST00000628937 1088 ntBASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 AC245100.8-202ENST00000629247 1058 ntBASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
ARHGEF4Q9NR80 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 AC079630.1-202ENST00000618127 1840 ntBASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.25■■□□□ 1.31
ARHGEF4Q9NR80 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 DUSP8P3-201ENST00000399571 1760 ntBASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.24■■□□□ 1.31
ARHGEF4Q9NR80 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
ARHGEF4Q9NR80 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF4Q9NR80 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF4Q9NR80 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF4Q9NR80 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
ARHGEF4Q9NR80 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.22■■□□□ 1.31
ARHGEF4Q9NR80 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms