Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAF4Q9BUZ4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAF4Q9BUZ4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 GUSBP5-202ENST00000510805 1989 ntBASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 AC133561.4-201ENST00000566112 224 ntBASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 AC005837.3-201ENST00000612163 286 ntBASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAF4Q9BUZ4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAF4Q9BUZ4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF4Q9BUZ4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAF4Q9BUZ4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF4Q9BUZ4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 SRD5A1P1-201ENST00000442297 786 ntBASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF4Q9BUZ4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms