Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHDHQ8NE62 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CHDHQ8NE62 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHDHQ8NE62 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.98■□□□□ 0.95
CHDHQ8NE62 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHDHQ8NE62 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.98■□□□□ 0.95
CHDHQ8NE62 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.98■□□□□ 0.95
CHDHQ8NE62 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHDHQ8NE62 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHDHQ8NE62 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHDHQ8NE62 AC239859.2-201ENST00000444165 318 ntBASIC20.97■□□□□ 0.95
CHDHQ8NE62 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.97■□□□□ 0.95
CHDHQ8NE62 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHDHQ8NE62 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 Z92544.1-202ENST00000571933 1220 ntBASIC20.96■□□□□ 0.95
CHDHQ8NE62 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.96■□□□□ 0.95
CHDHQ8NE62 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHDHQ8NE62 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.95
CHDHQ8NE62 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 MIR6722-201ENST00000617286 78 ntBASIC20.95■□□□□ 0.94
CHDHQ8NE62 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHDHQ8NE62 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CHDHQ8NE62 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHDHQ8NE62 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.94■□□□□ 0.94
CHDHQ8NE62 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHDHQ8NE62 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHDHQ8NE62 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHDHQ8NE62 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHDHQ8NE62 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHDHQ8NE62 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHDHQ8NE62 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms