Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 AF131216.4-201ENST00000638924 1588 ntBASIC21.84■■□□□ 1.09
APLFQ8IW19 AC096631.2-201ENST00000436136 790 ntBASIC21.84■■□□□ 1.09
APLFQ8IW19 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.84■■□□□ 1.09
APLFQ8IW19 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.84■■□□□ 1.09
APLFQ8IW19 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.84■■□□□ 1.09
APLFQ8IW19 AC005837.3-201ENST00000612163 286 ntBASIC21.84■■□□□ 1.09
APLFQ8IW19 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
APLFQ8IW19 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.83■■□□□ 1.09
APLFQ8IW19 GUSBP5-202ENST00000510805 1989 ntBASIC21.83■■□□□ 1.09
APLFQ8IW19 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
APLFQ8IW19 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.83■■□□□ 1.09
APLFQ8IW19 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
APLFQ8IW19 AL512631.2-201ENST00000604634 923 ntBASIC21.83■■□□□ 1.09
APLFQ8IW19 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
APLFQ8IW19 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.83■■□□□ 1.08
APLFQ8IW19 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
APLFQ8IW19 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.83■■□□□ 1.08
APLFQ8IW19 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
APLFQ8IW19 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.82■■□□□ 1.08
APLFQ8IW19 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.82■■□□□ 1.08
APLFQ8IW19 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.82■■□□□ 1.08
APLFQ8IW19 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.82■■□□□ 1.08
APLFQ8IW19 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.82■■□□□ 1.08
APLFQ8IW19 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.82■■□□□ 1.08
APLFQ8IW19 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
APLFQ8IW19 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
APLFQ8IW19 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APLFQ8IW19 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
APLFQ8IW19 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
APLFQ8IW19 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.81■■□□□ 1.08
APLFQ8IW19 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.81■■□□□ 1.08
APLFQ8IW19 AL137060.1-201ENST00000618151 2648 ntBASIC21.81■■□□□ 1.08
APLFQ8IW19 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
APLFQ8IW19 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
APLFQ8IW19 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.8■■□□□ 1.08
APLFQ8IW19 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
APLFQ8IW19 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
APLFQ8IW19 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
APLFQ8IW19 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
APLFQ8IW19 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.79■■□□□ 1.08
APLFQ8IW19 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APLFQ8IW19 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.79■■□□□ 1.08
APLFQ8IW19 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.79■■□□□ 1.08
APLFQ8IW19 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
APLFQ8IW19 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
APLFQ8IW19 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.78■■□□□ 1.08
APLFQ8IW19 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.78■■□□□ 1.08
APLFQ8IW19 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.78■■□□□ 1.08
APLFQ8IW19 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
APLFQ8IW19 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
APLFQ8IW19 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
APLFQ8IW19 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
APLFQ8IW19 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
APLFQ8IW19 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
APLFQ8IW19 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
APLFQ8IW19 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.76■■□□□ 1.07
APLFQ8IW19 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
APLFQ8IW19 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
APLFQ8IW19 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
APLFQ8IW19 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms