Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 GRE3YHR104W 984 nt5.17□□□□□ -1.58
SSL2Q00578 SNO1YMR095C 675 nt5.17□□□□□ -1.58
SSL2Q00578 TAF3YPL011C 1062 nt5.17□□□□□ -1.58
SSL2Q00578 PRP43YGL120C 2304 nt5.17□□□□□ -1.58
SSL2Q00578 ECM18YDR125C 1362 nt5.16□□□□□ -1.58
SSL2Q00578 PBI1YPL272C 1554 nt5.16□□□□□ -1.58
SSL2Q00578 YOR1YGR281W 4434 nt5.16□□□□□ -1.58
SSL2Q00578 SAS10YDL153C 1833 nt5.16□□□□□ -1.58
SSL2Q00578 APM3YBR288C 1452 nt5.16□□□□□ -1.58
SSL2Q00578 ZRT1YGL255W 1131 nt5.16□□□□□ -1.58
SSL2Q00578 YHR214WYHR214W 612 nt5.16□□□□□ -1.58
SSL2Q00578 HOT13YKL084W 351 nt5.16□□□□□ -1.58
SSL2Q00578 TVP38YKR088C 1014 nt5.16□□□□□ -1.58
SSL2Q00578 SPC3YLR066W 555 nt5.16□□□□□ -1.58
SSL2Q00578 EMG1YLR186W 759 nt5.16□□□□□ -1.58
SSL2Q00578 YAR066WYAR066W 612 nt5.16□□□□□ -1.58
SSL2Q00578 IDI1YPL117C 867 nt5.16□□□□□ -1.58
SSL2Q00578 BMH1YER177W 804 nt5.15□□□□□ -1.59
SSL2Q00578 CUP1-1YHR053C 186 nt5.15□□□□□ -1.59
SSL2Q00578 CUP1-2YHR055C 186 nt5.15□□□□□ -1.59
SSL2Q00578 CMC1YKL137W 336 nt5.15□□□□□ -1.59
SSL2Q00578 RPS0BYLR048W 759 nt5.15□□□□□ -1.59
SSL2Q00578 NMA1YLR328W 1206 nt5.15□□□□□ -1.59
SSL2Q00578 VMA6YLR447C 1038 nt5.15□□□□□ -1.59
SSL2Q00578 YBR126W-AYBR126W-A 207 nt5.15□□□□□ -1.59
SSL2Q00578 CSH1YBR161W 1131 nt5.15□□□□□ -1.59
SSL2Q00578 ADE13YLR359W 1449 nt5.14□□□□□ -1.59
SSL2Q00578 LDB17YDL146W 1476 nt5.14□□□□□ -1.59
SSL2Q00578 YFL041W-AYFL041W-A 192 nt5.14□□□□□ -1.59
SSL2Q00578 DDI2YFL061W 678 nt5.14□□□□□ -1.59
SSL2Q00578 CAX4YGR036C 720 nt5.14□□□□□ -1.59
SSL2Q00578 SPO11YHL022C 1197 nt5.14□□□□□ -1.59
SSL2Q00578 APS1YLR170C 471 nt5.14□□□□□ -1.59
SSL2Q00578 RAD10YML095C 633 nt5.14□□□□□ -1.59
SSL2Q00578 RPS10BYMR230W 318 nt5.14□□□□□ -1.59
SSL2Q00578 DDI3YNL335W 678 nt5.14□□□□□ -1.59
SSL2Q00578 YNR025CYNR025C 360 nt5.14□□□□□ -1.59
SSL2Q00578 YPR027CYPR027C 834 nt5.14□□□□□ -1.59
SSL2Q00578 NCE102YPR149W 522 nt5.14□□□□□ -1.59
SSL2Q00578 COT1YOR316C 1320 nt5.14□□□□□ -1.59
SSL2Q00578 ESC2YDR363W 1371 nt5.14□□□□□ -1.59
SSL2Q00578 ARG4YHR018C 1392 nt5.14□□□□□ -1.59
SSL2Q00578 VID30YGL227W 2877 nt5.14□□□□□ -1.59
SSL2Q00578 GPR1YDL035C 2886 nt5.13□□□□□ -1.59
SSL2Q00578 CDC8YJR057W 651 nt5.13□□□□□ -1.59
SSL2Q00578 YOR008W-BYOR008W-B 102 nt5.13□□□□□ -1.59
SSL2Q00578 SPS4YOR313C 1017 nt5.13□□□□□ -1.59
SSL2Q00578 ALG1YBR110W 1350 nt5.13□□□□□ -1.59
SSL2Q00578 PUT1YLR142W 1431 nt5.13□□□□□ -1.59
SSL2Q00578 YLR108CYLR108C 1458 nt5.13□□□□□ -1.59
SSL2Q00578 BUD7YOR299W 2241 nt5.12□□□□□ -1.59
SSL2Q00578 CTT1YGR088W 1689 nt5.12□□□□□ -1.59
SSL2Q00578 YER158CYER158C 1722 nt5.12□□□□□ -1.59
SSL2Q00578 HMRA1YCR097W 381 nt5.12□□□□□ -1.59
SSL2Q00578 HNT2YDR305C 654 nt5.12□□□□□ -1.59
SSL2Q00578 YDR545C-AYDR545C-A 480 nt5.12□□□□□ -1.59
SSL2Q00578 YEL077W-AYEL077W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YER190C-BYER190C-B 483 nt5.12□□□□□ -1.59
SSL2Q00578 COS4YFL062W 1140 nt5.12□□□□□ -1.59
SSL2Q00578 YFL068WYFL068W 483 nt5.12□□□□□ -1.59
SSL2Q00578 YGR296C-BYGR296C-B 483 nt5.12□□□□□ -1.59
SSL2Q00578 YHL050W-AYHL050W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YHR219C-AYHR219C-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 GPP1YIL053W 753 nt5.12□□□□□ -1.59
SSL2Q00578 YIL177W-AYIL177W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 SFH5YJL145W 885 nt5.12□□□□□ -1.59
SSL2Q00578 YJL225W-AYJL225W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YAL047W-AYAL047W-A 330 nt5.12□□□□□ -1.59
SSL2Q00578 YLL066W-AYLL066W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YLL067W-AYLL067W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 NDL1YLR254C 570 nt5.12□□□□□ -1.59
SSL2Q00578 YLR466C-AYLR466C-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YLR467C-AYLR467C-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 SPC2YML055W 537 nt5.12□□□□□ -1.59
SSL2Q00578 YML133W-BYML133W-B 483 nt5.12□□□□□ -1.59
SSL2Q00578 YMR181CYMR181C 465 nt5.12□□□□□ -1.59
SSL2Q00578 YNL339W-BYNL339W-B 483 nt5.12□□□□□ -1.59
SSL2Q00578 AIF1YNR074C 1137 nt5.12□□□□□ -1.59
SSL2Q00578 YBL113W-AYBL113W-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YOR396C-AYOR396C-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 YPL283W-BYPL283W-B 483 nt5.12□□□□□ -1.59
SSL2Q00578 YPR204C-AYPR204C-A 483 nt5.12□□□□□ -1.59
SSL2Q00578 DEG1YFL001W 1329 nt5.12□□□□□ -1.59
SSL2Q00578 ERG4YGL012W 1422 nt5.12□□□□□ -1.59
SSL2Q00578 MAK11YKL021C 1407 nt5.12□□□□□ -1.59
SSL2Q00578 MEF2YJL102W 2460 nt5.12□□□□□ -1.59
SSL2Q00578 MPH2YDL247W 1830 nt5.11□□□□□ -1.59
SSL2Q00578 ARN1YHL040C 1884 nt5.11□□□□□ -1.59
SSL2Q00578 HSP82YPL240C 2130 nt5.11□□□□□ -1.59
SSL2Q00578 YDL183CYDL183C 963 nt5.11□□□□□ -1.59
SSL2Q00578 CAB1YDR531W 1104 nt5.11□□□□□ -1.59
SSL2Q00578 YFL064CYFL064C 525 nt5.11□□□□□ -1.59
SSL2Q00578 TIM21YGR033C 720 nt5.11□□□□□ -1.59
SSL2Q00578 YLR374CYLR374C 390 nt5.11□□□□□ -1.59
SSL2Q00578 RUF20RUF20 443 nt5.11□□□□□ -1.59
SSL2Q00578 SAP30YMR263W 606 nt5.11□□□□□ -1.59
SSL2Q00578 SPO19YPL130W 672 nt5.11□□□□□ -1.59
SSL2Q00578 NRG2YBR066C 663 nt5.11□□□□□ -1.59
SSL2Q00578 YPR202WYPR202W 717 nt5.11□□□□□ -1.59
SSL2Q00578 ATG14YBR128C 1035 nt5.11□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms